Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7211 181 1e-40 seq10759 114 1e-20 seq4461 105 7e-18 seq1209 104 2e-17 >seq7211 Length=2767 Score = 181 bits (200), Expect = 1e-40 Identities = 729/1136 (64%), Gaps = 23/1136 (2%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| || | || || | | || | ||| ||| ||| Sbjct 321 GGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAG 380 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | ||||| ||||| || || || | || | || || ||||| || | Sbjct 381 GCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAA 440 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 || || | || || | ||||||| | | | ||| | | | || ||| |||| Sbjct 441 GCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGGTCTCCCAGTCCC 500 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA--ACACTCCTCGACTGGCGGG 153265 | || | || || || | |||||||||||| |||| | | || |||| | |||||| Sbjct 501 AGAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATAC-CCTC-AGAGGCGGG 558 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTA-GCCTCGA 153324 | ||| || || |||| || || | |||||| | ||| | | || || Sbjct 559 AGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGA 617 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384 | || ||| ||| ||||| ||| ||| || || ||||| | || || || Sbjct 618 GGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACT 677 Query 153385 CGTACGGCATGCGCAGCAGC-ACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 || | ||||||||||| ||| | || || || || |||||||||| ||| || || ||| Sbjct 678 CGAAAGGCATGCGCAG-AGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATG 736 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATA 153503 ||||| || | ||||||| | || || | || ||||| || |||||| Sbjct 737 GGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATA 796 Query 153504 ATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAG 153563 || |||| |||||||| || || || | || | | | | |||| ||| |||||| Sbjct 797 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATAG 856 Query 153564 GTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCC 153623 || ||| | | | | | || ||| | ||| || || || ||||| || Sbjct 857 CAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCA 916 Query 153624 GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACG 153683 ||| |||| | ||| ||||| | ||||||| |||||| ||| || ||| | Sbjct 917 ACCTCATCGGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTG 976 Query 153684 CCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 153743 |||| || | ||| ||||| ||||| ||||| ||| ||| | |||||| | || | Sbjct 977 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTG 1036 Query 153744 CCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGC 153800 ||||||||| |||| |||| ||| | ||| || | ||| || || | Sbjct 1037 CCGGTCTCGGTCTGCGCCTCGAGGATGGCATACC---AGAGCTTCTGGGCCTTCATGGTC 1093 Query 153801 TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAG 153860 | ||| |||| | |||| || ||||| || ||| ||||| ||||| ||| Sbjct 1094 TTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAG 1153 Query 153861 CAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTG 153920 |||||||| || ||||| |||| | |||||||| || | ||| | ||| | | Sbjct 1154 CAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCG 1213 Query 153921 ACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAA 153980 || || |||||| ||||| || | |||||| || | |||||||| || | Sbjct 1214 ACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACC 1273 Query 153981 TCCTCCGCGCC---CATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAG 154037 |||||| ||| | ||||| ||| | || | | ||| || ||||||||| Sbjct 1274 TCCTCCTTGCCGTGGTTCTTGCG---CAGGTCAAGGAACTCAAAGACATCTGCGTGCCAG 1330 Query 154038 GGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGC 154094 || |||| ||||| ||| | |||||| ||| || || ||||| ||||||| || Sbjct 1331 GGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGG 1390 Query 154095 ACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 | | ||||||||||| || | |||||| | ||| | | ||| |||||||| Sbjct 1391 GCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCGTTGGT 1446 >seq10759 Length=1737 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | ||| | ||| | | | |||||||| || |||||||||||| | Sbjct 1124 CCGCCACGGAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1183 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || ||||| | | |||| || ||||| ||||| || || Sbjct 1184 AGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGG 1243 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | ||| || | ||| ||| ||||||||| Sbjct 1244 ATGCCCTCCTTGTC-CTGAATCTTGGACTTCACGTTG-TCAATGGTATCGCTCGACTCCA 1301 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| ||||| || ||||| |||||||| Sbjct 1302 CCTCTAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 1350 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| | || | | |||||||| || |||||||||||||| Sbjct 1352 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 1411 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||||||| || || |||| | || || ||||| ||||| ||||| Sbjct 1412 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 1471 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| || || | | || | ||||||| ||||||||| Sbjct 1472 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1531 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| || | || |||||||| || || || || Sbjct 1532 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGAC 1566 >seq4461 Length=4022 Score = 105 bits (116), Expect = 7e-18 Identities = 339/518 (65%), Gaps = 21/518 (4%) Strand=Plus/Minus Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACG 52388 || ||| | ||||| ||||| | ||||| || |||||| || | | | | | | Sbjct 1729 CCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAACTCGTCC 1670 Query 52389 CTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTT 52448 | || |||| | || ||||| || || ||||| | || || ||| |||| Sbjct 1669 TTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 1610 Query 52449 GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAG 52508 ||| ||||||| | | || | | ||| | ||||| |||||||| || ||||||| Sbjct 1609 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAG 1550 Query 52509 TTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCT---ACTACAAG--- 52562 | || || || ||||| || || ||||| |||||||| |||||| ||| | | Sbjct 1549 CTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCATGCCTCCTCCACTCCCACCTC 1490 Query 52563 -ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGT 52621 | | |||| | | || | | || || ||| | ||| ||| || || || Sbjct 1489 AAGGGCCGTGCCAGCAA----GCA---GGTCA---TCCAGGACATCATCACCGATGCCGT 1440 Query 52622 GGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGC 52681 | || || ||||||| | || | || || || || ||||| ||||||||||| Sbjct 1439 CACCATTGAGCAGGAGTTCCTGACCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGC 1380 Query 52682 GCAGTCCATGT-GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGC 52740 | |||| ||| |||||||||||| || || || || || | || ||||| | Sbjct 1379 CGACCTCATGAAGCG-GTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGG-C 1322 Query 52741 AGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAG 52799 | | | ||| || ||| || ||| || || || || ||| | ||||| || || | Sbjct 1321 AACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGT 1262 Query 52800 GGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||||| ||||||||||| ||||| || || Sbjct 1261 GGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 1224 >seq1209 Length=9026 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || |||||||| || || || | | | Sbjct 5301 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 5360 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| ||||| || || || || || ||||| ||| || || | | Sbjct 5361 GATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 5420 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||||||||||| || | || || || || || || || || Sbjct 5421 GTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGAC 5480 Query 138603 AAAAATCTGCAT 138614 ||| |||||||| Sbjct 5481 AAAGATCTGCAT 5492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061240036160