Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4461 262 4e-65 seq1209 125 7e-24 seq10759 122 9e-23 seq10395 114 1e-20 seq3577 107 2e-18 >seq4461 Length=4022 Score = 262 bits (290), Expect = 4e-65 Identities = 565/831 (68%), Gaps = 29/831 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 1239 TTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1298 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||| ||| | |||||| || ||||||| || | |||||| |||||| Sbjct 1299 GTGGCCTTGTAGACCTTCTCGTTGCCGA---GGGCGACGAGGAGGCGGTCGGCGACGAAC 1355 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTC 132800 |||||||| || |||| ||| || | || ||||| |||| || || || || Sbjct 1356 TCGATGTACCGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCAGGGG-AGGGCCTC 1414 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCC---TAACGCGC-- 132855 ||| || || ||||| |||| ||| || ||||||| ||| ||| | || || Sbjct 1415 GGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTGGATGACCTGCTT 1474 Query 132856 GCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAG 132915 || | || ||||| ||| | || | | | ||| ||||||||| || | Sbjct 1475 GCTG-GCACGGCCCTTG----AGGTGGGAGTGGAGGAGGCATGCAAAGTCGGTGTGAAGA 1529 Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 |||||||| | || ||||| |||||| || |||| ||| ||||||||||| || || Sbjct 1530 CCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTTC 1589 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || |||| ||| || || ||||||| ||||| ||||| || || Sbjct 1590 TTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCAAAG 1649 Query 133036 GCCACCAGGCGCTCGCCGAACGTGGC-TTCTT-TGCTGGCGATCCAGCGCAGCGCCCATT 133093 || || || |||| | || | | ||||| | |||| ||||| || | ||||| | Sbjct 1650 GCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG--ATCCATCGGATGGCCCAGT 1707 Query 133094 CGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTT 133153 ||||||| | || ||| || || || || |||||||| || | | || ||| | Sbjct 1708 CGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAG--GTAGGTTCGTTG 1765 Query 133154 CCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTC 133211 ||| | | ||||||||| |||||| ||| || | || ||||| | |||||| Sbjct 1766 AGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTC 1825 Query 133212 CATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAA 133271 ||| ||| || |||||||| ||||| || |||||| | ||| || || ||| Sbjct 1826 CATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTCGCCGCTGAA 1885 Query 133272 ACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTG 133331 |||||||| || || ||||||||||||||||| ||| ||||| ||||| || | ||| Sbjct 1886 TCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCGAGGATGTG 1945 Query 133332 CTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGA 133388 || ||| |||||| | | ||| ||| | ||||||| | |||||||| Sbjct 1946 GGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGGAGATCCTTGGA 2005 Query 133389 CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || || | ||||||| | ||||| || || ||||| || || |||||||| Sbjct 2006 TAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCAGCCTTCTTGTACAT 2056 >seq1209 Length=9026 Score = 125 bits (138), Expect = 7e-24 Identities = 163/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || |||||||| || || |||||| |||| || ||| | Sbjct 5495 AAGATGCAGATCTTTGTCAAGACCCTCACGGGGAAGACAATCACCCTCGAGGTGGAGTCT 5436 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| |||| Sbjct 5435 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 5377 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | |||||||| | |||||| Sbjct 5376 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 5317 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || || || |||| || || Sbjct 5316 CAACATCCAGAAGGAGAGC-ACCCTCCACCTGGTCCTCCG 5278 >seq10759 Length=1737 Score = 122 bits (134), Expect = 9e-23 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||| || || || |||||| |||| || ||| | |||||| Sbjct 1571 TAGTCGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGA 1512 Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | |||| | || || |||| || || ||||| ||||| | ||||| ||||| Sbjct 1511 TCGACAACG-TCAAGTCGAAGATCCAAGATAAGGAGGGTATTCCTCCTGACCAGCAGCGC 1453 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 || |||| ||| ||||| ||||| || |||| || || |||| ||||||||||||||| Sbjct 1452 CTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAACATCCAG 1393 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||| ||||| |||| || ||| || | || || Sbjct 1392 AAGGAGTCGACTCTGCACCTGGTTCTTCGTCTGCGCGGTGG 1352 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || |||||||| | || || ||| | | | Sbjct 1350 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACCATCACTCTAGAGGTGGAGTCGAGC 1291 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| || ||| | ||||| Sbjct 1290 GATACCATTGACAACG-TGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 1232 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || |||||||| |||| |||||||| ||||||||| Sbjct 1231 GCAGCGACTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGTCCGACTACAA 1172 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || ||| | || || ||| | | ||||| Sbjct 1171 CATCCAGAAGGAGTCGACCCTTCATCTTGTTCTCCGTCTCCGTGGCGG 1124 >seq10395 Length=1652 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 173 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 232 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 233 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGACTG 292 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| |||||||| || | || ||||| ||||||||||||||| ||| Sbjct 293 ATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTTTCCGACTACAACATCCAGAAG 352 Query 38433 G 38433 | Sbjct 353 G 353 >seq3577 Length=4491 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 |||||||| ||||| ||| |||| |||||| || | || | | | | | | || Sbjct 189 ACGGGCAAGACCATTACCCTCGAGGTCGAGTCCTCGGATACCATCGACAATGTCAAGTCG 130 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || || | ||||| ||||| || ||| ||||||| ||||| || |||| ||| ||||| Sbjct 129 AAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 70 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||| || || | |||||||| ||||||||||||||| ||||| |||| || || Sbjct 69 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499970054955520