Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq10759 132 1e-25 seq10395 125 2e-23 seq1209 120 7e-22 seq7211 84.2 5e-11 >seq10759 Length=1737 Score = 132 bits (146), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| ||||| || ||||| || || || ||||| |||| || || | || ||||| Sbjct 1141 AACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTC 1200 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| || ||||||||||| || ||||| || || ||||| || ||||| || Sbjct 1201 CAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 1260 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || ||| ||||| |||||||| || ||| ||||| || || || | || Sbjct 1261 AATCTTGGACTTCACGTTGTCAATGGTATCGCTCGA---CTCCACCTCTAGAGTGATGGT 1317 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| || | ||| || || || | ||||| Sbjct 1318 CTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 1350 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| ||||| ||||| || || || ||||| ||| ||||||| || || || Sbjct 1369 AACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTC 1428 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || || ||||| |||||||| || || || ||||| Sbjct 1429 GAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTG 1488 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || || ||||| ||| ||||| || ||||| | ||||| Sbjct 1489 GATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 1548 Query 195111 TCCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 1549 ACCAGTGAGGGTCTTGACGA 1568 >seq10395 Length=1652 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| ||| |||| ||||| || |||||||| || |||||||| Sbjct 351 TTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 292 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 ||||| || ||||| || || ||||| || ||||| || || || |||||| || ||| Sbjct 291 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 232 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||||||||| || || || ||||| | ||||| || |||| || || ||||| Sbjct 231 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 173 >seq1209 Length=9026 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| ||| || || | ||||| ||| Sbjct 5284 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 5343 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| ||||| || ||||| || || ||||| || ||||| || Sbjct 5344 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 5403 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| ||| ||||| || ||||| | ||||| Sbjct 5404 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTC 5463 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 5464 CCCGTGAGGGTCTTGACAAAGATCTGCAT 5492 >seq7211 Length=2767 Score = 84.2 bits (92), Expect = 5e-11 Identities = 182/267 (68%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 160599 TCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGGAGCCTTTTCT 160658 |||||| | ||||||| ||||||||| | || | | || || || |||| ||| | | Sbjct 1244 TCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGTGACTGGACCCTCATGT 1185 Query 160659 GTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAGACTCTTTATG 160718 ||||||| || || || || | || ||||| ||||||||| ||||||| | Sbjct 1184 GTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTATGGCGAGGAGTTCGAGGCTCTTTACG 1125 Query 160719 AAAGATACGAAAAAGAGGG-AAGAGCCAAAAAGGTCGTGAAGGCCCAAGAACTGTGGCAT 160777 ||| || || || | ||| ||| | | || | | |||||||||| | || ||| || Sbjct 1124 AAAAGTATGAGAAGGCGGGCAAGGGTCGCAA-GACCATGAAGGCCCAGAAGCTCTGGTAT 1066 Query 160778 CACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAGGATGCCATC 160837 |||||| | || || |||| || | ||||| || |||||||| ||| | Sbjct 1065 GCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCTTCATGCTTTACAAGGA--CCA-C 1009 Query 160838 TGT---CGCAAGAGTAACCAGAAGAAC 160861 || |||||||| |||||||||||| Sbjct 1008 TGCAACCGCAAGAGCAACCAGAAGAAC 982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109020628424276