Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq8425 113 4e-20 seq1954 82.4 6e-11 >seq8425 Length=2318 Score = 113 bits (124), Expect = 4e-20 Identities = 201/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 29686 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACC 29745 |||||||| || |||| | |||||||| ||||| | |||| | | | ||| || Sbjct 687 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 629 Query 29746 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29801 || || | | ||| ||| |||||| | |||||| | ||| ||||| || || Sbjct 628 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 569 Query 29802 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCC 29861 || | |||||||| || ||||||||||| || || |||| | ||| | | || | Sbjct 568 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTGC 510 Query 29862 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29920 | || | | || |||||| |||||||||| || || || | ||||||||| |||| Sbjct 509 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 450 Query 29921 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 | || || || ||||| |||||||| | || | |||||||||||| || Sbjct 449 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 401 >seq1954 Length=6437 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 52016 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT- 52074 ||||||||| | ||||||| ||| | || |||| |||||||||||||| || Sbjct 4882 CGTCAAGGTCCGTGTGAGGACGACCAAGATTCCCCAGATTGGCGACAAGTTTGCCTCTCG 4941 Query 52075 TCACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 52132 |||||| || ||||| || || | | ||| | | | ||||||| ||||||||| Sbjct 4942 TCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCGTC--AGGAGGATATGCCCTTCAG 4998 Query 52133 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGAC 52192 || ||| || ||| || ||| | ||||| |||||||||||| |||| || | ||||| Sbjct 4999 CAGGGAGGGTGTGACACCGGACATTATCATTAACCCCCACGCCATTCCGTCGCGAATGAC 5058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408456107684444