Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7211 439 5e-118 seq4461 203 6e-47 >seq7211 Length=2767 Score = 439 bits (486), Expect = 5e-118 Identities = 1158/1738 (67%), Gaps = 71/1738 (4%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| |||||||| ||| || ||||| | | | ||| || ||||| | | || | Sbjct 109 GTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTG 168 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | ||| || | |||||| ||||||||| ||| | |||| || | |||| | ||| Sbjct 169 GCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGG 228 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CATGTCCTCGTTCC 212871 ||||||||| | || || || | | | || | | | | |||| | || || Sbjct 229 GATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCATGGCATCCGACC 284 Query 212872 AGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 | |||||| || | ||| ||||| ||| |||||||| | |||||| || || | Sbjct 285 ACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAG 344 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 ||| || | | |||||| | ||| || ||||| ||||||| || ||||||||| |||| Sbjct 345 CGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCA 404 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | ||||| | ||| ||||| || ||||| || || | ||| |||||||| | | |||| Sbjct 405 GGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGT 464 Query 213052 GCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC 213110 |||| || | || || | ||| |||||||||| | |||| ||| | Sbjct 465 GCTCCTTGACCTGCTCCCTGAGGGTCT-CCCAGTCCCAGAGGTCAGA-AGG--------C 514 Query 213111 TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGGGCTGCCCTGGTA 213166 ||||| ||||||||||| ||||| | || || |||| |||| ||||| | | Sbjct 515 TTCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGGAGAGCCCTTGAA 570 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGT 213225 | ||||||||| || | |||||||||||||| ||| || || |||||||| | || Sbjct 571 GGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGT 629 Query 213226 AGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCA 213285 ||||||| || || |||| | ||||||||| ||||| || ||| ||| ||||| Sbjct 630 AGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGC 689 Query 213286 TCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCA 213345 || |||| ||||||| || |||||||| || | || ||||||| ||||| || Sbjct 690 GCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCA 749 Query 213346 GGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGG 213404 ||| ||| |||| ||| | ||||| ||| |||||| ||| |||| ||| Sbjct 750 TGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGG 808 Query 213405 TTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGC----- 213459 ||||| | | || | ||||| | | || ||| || ||| | |||| Sbjct 809 TTGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAGTCATAGCAAGCA 862 Query 213460 -CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 | ||| | | ||| ||||||||| | || |||||||| || || ||||| Sbjct 863 TCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCA 922 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | | | | |||||| || ||||||||||| || ||| || ||||||||||||||| Sbjct 923 TCGGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGG 982 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGT 213637 |||| ||| ||| ||||| | |||| |||||||| |||||| ||||| ||||| Sbjct 983 TTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTGCCGGT 1041 Query 213638 CTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695 ||| ||| | | | || | |||| |||||| | | |||||| || | || Sbjct 1042 CTCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT---CATGGTCTTG 1096 Query 213696 ACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755 | | | || ||| |||| |||||| || | | ||| || | ||| || Sbjct 1097 CGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAG 1156 Query 213756 CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGAC 213814 | |||| || || || ||||||||||||| ||||||| ||| || |||| ||| Sbjct 1157 TCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTC-GAC 1215 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || |||||| || || || | ||| || || ||||||||| | || | ||| Sbjct 1216 ACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTC 1275 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| || ||| |||||||| || || || ||||||| || |||||||| ||||| Sbjct 1276 CTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTC 1335 Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991 | ||||||||||||||| || | || | ||||| |||||||| || || ||| Sbjct 1336 AAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGT 1395 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 ||||||||| || || | ||| | |||||||| |||||||| || || || Sbjct 1396 GTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCGTTGGTACCAGCGAT 1455 Query 214052 ATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108 || ||||| | ||| | | ||| | | | || || || ||||| || ||| Sbjct 1456 GTAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTCAGGCCGATACCACCCGCCATCTT 1512 Query 214109 GGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAG 214168 |||||||||||| ||| | | | ||| || || || | |||||||| ||| | | Sbjct 1513 GGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCAT 1572 Query 214169 GTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGG 214228 || | || |||||| || ||||| ||| || | |||| ||||| || ||||| Sbjct 1573 GTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGG 1632 Query 214229 GCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGAT 214288 | ||||||| | | |||||| | || | ||| ||||||||||||| || || Sbjct 1633 GGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGTCTCCAGAACACGCTCAAT 1692 Query 214289 GTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGG 214347 |||| ||| | || | || | ||| | |||||||||||| | ||| | Sbjct 1693 ATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTC-AACA 1750 Query 214348 GTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || ||| | |||||| |||||||| ||||| ||||||||||| |||||||| Sbjct 1751 ATC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTA 1806 >seq4461 Length=4022 Score = 203 bits (224), Expect = 6e-47 Identities = 486/729 (67%), Gaps = 11/729 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1220 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1279 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 1280 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 1338 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| ||||||| | ||||||||| | |||| Sbjct 1339 GGCGGTCGGCGACGAACTCGATGTACCGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 1398 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | |||| || || ||||||| ||| || ||||| || | || | Sbjct 1399 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 1458 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || | | || || || | || | | | | || | ||| | ||| |||| Sbjct 1459 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 1515 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||| | || ||||| || ||||||| ||||||| ||| || ||||||| Sbjct 1516 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 1575 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || ||||||||||| || | || || | || ||||||||| |||| Sbjct 1576 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 1635 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || || || ||| ||| | || | || || | ||||||||| |||||| Sbjct 1636 CAACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 1695 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 | |||||||| |||||||| |||||| || || ||||| ||||| |||||| | Sbjct 1696 GGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT 1755 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | | | | | ||| | ||||| | |||| ||| | ||| |||| | Sbjct 1756 AGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 1812 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || ||||||||| ||||||||| | |||||| | ||| | Sbjct 1813 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 1872 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||||| ||| | || ||||| ||||| || || || || ||||| |||| Sbjct 1873 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 1932 Query 48555 AGGCAAGGA 48563 |||| |||| Sbjct 1933 AGGCGAGGA 1941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931155203179520