Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4461 150 2e-30 seq7211 138 1e-26 seq3720 125 9e-23 seq3597 120 4e-21 seq32233 98.7 1e-14 seq362 93.3 5e-13 >seq4461 Length=4022 Score = 150 bits (166), Expect = 2e-30 Identities = 184/250 (74%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 1215 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 1274 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| ||||| | || Sbjct 1275 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACG 1334 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || |||||||||||||| |||||||||||| | ||||||| ||||||||||||||| Sbjct 1335 AGGAGGCGGTCGGCGACGAACTCGATGTACCGCTTCATGAGGTCGGCGTTCATGCCGAGC 1394 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | |||| ||| ||||| | ||| || |||||| ||| |||| Sbjct 1395 AGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATG 1454 Query 868931 ATCTGCCTGG 868940 || | ||||| Sbjct 1455 ATGT-CCTGG 1463 Score = 150 bits (166), Expect = 2e-30 Identities = 213/291 (73%), Gaps = 15/291 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| ||||| ||||| ||||||||||| ||||| Sbjct 1529 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 1588 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296 ||||||||| ||||||| | | || || ||| ||| ||||| ||||| ||||| ||| Sbjct 1589 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCA 1646 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353 ||| ||| ||| |||| |||||| | |||| | |||| | |||||| || Sbjct 1647 AAGGCGACGAGACGCTGAGCAAAG--GACGAG----TTCTTGTCCTGGATCCATCGGATG 1700 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTC 869412 |||||||||||||| || | | | || | || || |||||| ||||||| ||| Sbjct 1701 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTT 1760 Query 869413 CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || || || ||||||| |||||||| || |||||||| |||||||| Sbjct 1761 C-GTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTC 1810 >seq7211 Length=2767 Score = 138 bits (152), Expect = 1e-26 Identities = 301/448 (67%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || |||| ||| ||||| || |||||||| || |||||||| Sbjct 1375 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGA 1434 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || || | ||| | ||| | ||| || | ||| || | ||| Sbjct 1435 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 1494 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || ||| ||||||||| | || || ||||| || || || || ||||| Sbjct 1495 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 1554 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| | |||||||| || || ||||| || || || || || | || || Sbjct 1555 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 1614 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || |||||||| ||||| | || |||||| |||| | ||||||| || |||||| Sbjct 1615 AGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGT 1674 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || || ||| | | |||||| |||| || ||||| | || Sbjct 1675 CTCCAGAACACGCTCAA---TATCGTC-----------ACCC-CAGATGCCGACAGACAC 1719 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| |||||| ||||| || | ||| | |||| |||||||| Sbjct 1720 ACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 1779 Query 1630485 CCGGCGCATG-GTCATGAGGCCAAAGTA 1630511 | || || | ||| ||| ||||||||| Sbjct 1780 TC-GCTCAAGAGTCTTGAAGCCAAAGTA 1806 Score = 111 bits (122), Expect = 2e-18 Identities = 321/497 (65%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 1628110 GGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGACGAAAACTGGA 1628167 |||||||||| | ||||||||| || || || || ||||| | | || || Sbjct 884 GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCGGGGGCGCAGTA--CTCGA 941 Query 1628168 CGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||||||||| || |||| | ||| | || |||||||||| ||||||| | | Sbjct 942 TAATCTCGGTGCAGAGATTGGAGCTACG-GATGGTGCCCAGGTTCTTCTGGTTGCTCTTG 1000 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 ||||| | |||||||| |||||| |||| |||||||||| |||||||| ||| | Sbjct 1001 CGGTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGG 1060 Query 1628287 ATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNNNNNNN 1628346 ||||| |||||| || | || || | | || | |||| Sbjct 1061 ATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCGCCTTCTCATAC 1120 Query 1628347 NNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGAC 1628406 || || || |||| ||||| ||| ||| ||||| |||| Sbjct 1121 TTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTG 1180 Query 1628407 GGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCG---CGGCGCATAAAGAGGTCACAC 1628463 ||||| | ||| | ||||| ||||| || | || || ||| ||||| || Sbjct 1181 GGACACATGAGGGTCCAGT---CACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 1237 Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 |||| || || || |||||||| || ||| ||||||||||||||||||||| Sbjct 1238 ATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGC 1297 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 1628583 ||||| || | || | | || |||||||| ||||| |||||| ||||||||| || Sbjct 1298 AGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCA 1357 Query 1628584 TTGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 1358 GGTCGCTTGTTGCCACC 1374 Score = 91.5 bits (100), Expect = 2e-12 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 1627293 CGTCCACAGGCCGCGCGCCATCA-GGCGCTTGACCAGGTGGCGGTTGACCACGGTAAAGT 1627351 || ||||||||| | | || || || ||||| ||| | ||||||| || || | Sbjct 280 CGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACT 338 Query 1627352 CGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCGGTGT 1627411 |||| | ||| || |||||| |||||||||| |||| |||| | |||| ||| Sbjct 339 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 398 Query 1627412 TGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTGCGCA 1627471 |||||||||||||||| || |||| || ||||| | || | || || |||||| | Sbjct 399 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 458 Query 1627472 GGCCGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGCGG 1627518 |||||||| | || || || | | || | |||||||||||| || Sbjct 459 TGCCGTGCTCCTTGACCT-GCTCCCTGAGGGTCTCCCAGTCCCAGAGG 505 >seq3720 Length=4695 Score = 125 bits (138), Expect = 9e-23 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| ||||||| |||||||||||||| || || ||| | || |||||| | || |||||| Sbjct 1463 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 1522 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| ||||||||||| || ||||| || ||||||| Sbjct 1523 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 1571 >seq3597 Length=4939 Score = 120 bits (132), Expect = 4e-21 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| | || ||||||| |||| ||||||||| || ||||||||||||| || ||| || Sbjct 3030 AAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGC 2971 Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165 | || |||| |||||||| || || || |||||||||| || |||||||||| Sbjct 2970 ATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGACC 2911 Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225 | || ||| | || |||||| ||| | | |||||||| |||| ||| || ||| Sbjct 2910 AGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGATGC 2851 Query 1574226 GCCATTCTG 1574234 ||||| ||| Sbjct 2850 GCCATCCTG 2842 >seq32233 Length=219 Score = 98.7 bits (108), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 18223 ACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACG 18282 ||||| || ||||| ||||| |||| |||||| |||||||| ||||||||| |||| Sbjct 29 ACGCCCCGGAACGAAAAGGATCGTGTCACCATCCACTCGGGCACCGAGAACGGCGTCACC 88 Query 18283 CTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCC 18342 |||||| | || || |||| || ||||| |||||||||||| ||||| | Sbjct 89 CTCGGCACCCCGATCCTCCTCACCGTCCCCAACGAGGACCAGCGGCCCAAGGACTACGGC 148 Query 18343 GACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAG 18396 |||| | || | ||||| ||| |||||||||| |||||| ||| ||| Sbjct 149 GACAAGACCATCGACCTCTACCCGCGCCCCAGCCACGCCGACTGGACCTACCTGGAAAAG 208 Query 18397 TACGGCATCAA 18407 |||||| |||| Sbjct 209 TACGGCGTCAA 219 >seq362 Length=14101 Score = 93.3 bits (102), Expect = 5e-13 Identities = 257/386 (67%), Gaps = 16/386 (4%) Strand=Plus/Plus Query 511949 GGCGTGGACGCCTCGCGCAGTCACACCAACGACATCAACCGCGTGGCCGCCGTGCTGGGC 512008 ||||| ||||| ||||| | ||||||||||| | | |||| || ||| | || Sbjct 13338 GGCGTCGACGCTTCGCGGACATACACCAACGACCTGTGGCAAGTGGTCGAGGTGTTTGGT 13397 Query 512009 ATCGAGGCCGCCGTGGCCGTGCTCTTTTCC--GAGATCAAGGCCGTCATCTCCTTTGACG 512066 |||||||| ||| | || ||||| || ||| | | ||| | | ||||||| Sbjct 13398 ATCGAGGCAGCCC-GTTCG-GCTCTGGTCAAGGAGTTGACCAACGTGCTGGCGTTTGACG 13455 Query 512067 GCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGCCGCGGAT 512126 | ||||||||||| | || ||| |||||||| || || |||| | | | |||| Sbjct 13456 GTTCCTACGTCAACCATCGTCACATTGCGCTGCTGACAGATGTCATGACGTACAGAGGAT 13515 Query 512127 CGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGCGCCGACCACGGCTTC-CTGTCGCGG 512185 | | ||| || || || ||||| ||||||| || || ||| | | | ||| ||| Sbjct 13516 CCATCTCGGCTGTGACCCGACACGGTATCAACCGTGCTGA-CACTGGTGCTCTGATGCGT 13574 Query 512186 GCCTCTTTCGAAGAGACCGTCGACATCCTCTTTGACGCGGCGGCCTTTGCCGAGACCGAC 512245 |||||||| ||||| ||||| ||| | | || || || || | || | || | | Sbjct 13575 TGTTCTTTCGAGGAGACGGTCGAGATCTTGCTCGAGGCTGCCGCGTCTG--GTGAGCTAG 13632 Query 512246 AAGATCACCGACG--GCTCGGTGACCGAGCCCATCATCCTGGGCCAGACGGCGCCCATCG 512303 | || |||| | ||||| || || |||| |||||||||| |||||| || | Sbjct 13633 ATGACTGCCGAGGTATCTCGGAGAACG------TCATGCTGGGCCAGATGGCGCCAATGG 13686 Query 512304 GCACGGCCATCTCGGACGTGCTCGTG 512329 |||||| | || || |||||| || Sbjct 13687 GCACGGGTAACTTTGATGTGCTCCTG 13712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104478006459676