Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4461 217 2e-50 seq7211 129 8e-24 seq3597 95.1 2e-13 >seq4461 Length=4022 Score = 217 bits (240), Expect = 2e-50 Identities = 403/572 (70%), Gaps = 31/572 (5%) Strand=Plus/Minus Query 1455765 GCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAG 1455824 || |||| | ||| ||| | |||||| || ||||| |||||||| || ||||| |||||| Sbjct 2075 GCAACCA-CAGATCTGGCAGATGTAC-AAGAAGGCTGAGGCCTCTTTCTGGACTGCCGAG 2018 Query 1455825 GAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGA 1455877 ||| | || || | || |||| ||||| ||| ||| | |||||| Sbjct 2017 GAGATTGATCTATCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTGCCGACGA 1962 Query 1455878 GCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCG 1455937 || ||| || ||| |||||||||| || ||| ||| || |||||||| || Sbjct 1961 GCAGTTCTTCGTCTCCCACATCCTCGCCTTCTT-CGCTGCCTCTGACGGCATCGTCAACG 1903 Query 1455938 AGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACG 1455997 ||||||| | || || || | |||||||| | || ||||| || | || |||| Sbjct 1902 AGAACCTTGTCGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACG 1843 Query 1455998 GGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCT 1456057 | ||||||||| || || ||||||||||| || |||||||||||||| || ||||||| Sbjct 1842 GCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCT 1783 Query 1456058 ACGTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCG 1456116 || ||||||| || | | | | ||| ||||||| |||||| || || | || | Sbjct 1782 ACATCAAGGAGCCTG-CTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGC 1724 Query 1456117 GTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACT 1456173 | | || |||||||||||||| || |||||| ||||| | |||| | || Sbjct 1723 ATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA----CTCGTC-CT 1669 Query 1456174 TTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTT 1456230 |||| |||| ||||||| |||||| | ||| ||||| ||||| ||| ||| || || Sbjct 1668 TTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTG 1609 Query 1456231 CTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACG 1456290 | | ||||||| |||||||||||||| ||||||||||| || | | |||| ||||| Sbjct 1608 C--CTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGG-CCTGACCTTTTCCAACG 1552 Query 1456291 AATTTATCAGTCGCGACGA-AGTTTTCACCCC 1456321 | | ||| ||| ||||| || ||||| || Sbjct 1551 AGCTCATCTCTCGTGACGAGGGTCTTCACACC 1520 Score = 111 bits (122), Expect = 2e-18 Identities = 179/252 (71%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| |||||| || ||| | ||||| | | |||| | || || || Sbjct 1456 ATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACCGAGGCCCTCCCCTGCGCC 1397 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||||||| | |||||| | |||||| || || ||||||||||||| Sbjct 1396 CTGCTCGGCATGAACGCCGAC-CTCATGAAGCGGTACATCGAGTTC-GTCGCCGACCGCC 1339 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| || ||||| |||| | | ||||||| ||| | ||| Sbjct 1338 TCCTCGTCGCCCTCGGCAACG-AGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATG 1280 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| ||||| |||| |||||||||||||| |||||| || || || || ||| Sbjct 1279 GAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 1220 Query 1456762 AAGGCCGGCGTC 1456773 ||||| || ||| Sbjct 1219 AAGGCTGGTGTC 1208 >seq7211 Length=2767 Score = 129 bits (142), Expect = 8e-24 Identities = 337/506 (67%), Gaps = 25/506 (5%) Strand=Plus/Minus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||||| || ||| | ||||| | | | ||| ||||| ||| ||||||| Sbjct 1860 CACAAGGAGGAGCTAGACTCGGCCATTGTCTATGACCGTGACTTCCAATACCAGTACTTT 1801 Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAA-AGTGC--GCGATATTGTCGTCGA 259797 || | ||| |||| || | |||||||| ||| | || || | ||||| | | Sbjct 1800 GGCTTCAAGACTCTTGAGC-GATCCTACCTCCTCAAGATTGATGGCAAGATTGTTG---A 1745 Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857 ||| |||||| | ||| |||||||||| | | ||| | |||| | || Sbjct 1744 GCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCA--TCTGGGGT----------GA 1697 Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCT 259916 | || | |||| || || | |||||| | ||||||| |||| ||| |||||| Sbjct 1696 CGATA---TTGAGCGTGTTCTGGAGACCTACAACCTCATGTCG-AGCAAGTTCTTCACCC 1641 Query 259917 CAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTC 259976 || | ||||| ||||| ||||| || || || | || ||| || || ||||| | Sbjct 1640 ATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCC 1581 Query 259977 TGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGC 260036 || | |||||||| | || || ||||| || ||||| || |||||| || || Sbjct 1580 TGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCA 1521 Query 260037 TCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCG 260096 | ||||||||| ||| || || ||||| | || ||| | || ||| | ||| Sbjct 1520 TGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCT 1461 Query 260097 CCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTA 260156 | ||| | || || |||||||| |||||||| | ||||||||||| || || | Sbjct 1460 CTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCA 1401 Query 260157 ACGACACGGCGCGCTACGTCGACCAG 260182 || |||| || || |||||||||||| Sbjct 1400 ACAACACTGCCCGGTACGTCGACCAG 1375 Score = 91.5 bits (100), Expect = 2e-12 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| ||||| ||| ||| || | ||||||||||| |||| |||| | |||| Sbjct 1076 AGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCTTCATGCTTTACA 1017 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAAC 262210 ||||| | ||||| | ||||||||| ||||||||||||||| | || |||| Sbjct 1016 AGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGTAG-CTCCAAT 958 Query 262211 CTGTGCACCGAGATCGTCCAGT 262232 || ||||||||||| || ||| Sbjct 957 CTCTGCACCGAGATTATCGAGT 936 >seq3597 Length=4939 Score = 95.1 bits (104), Expect = 2e-13 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 332878 CAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCCAG 332937 ||||||||| || || || |||| |||||||| | | ||| ||||||||| | Sbjct 2842 CAGGATGGCGCATCGCGATTGTAGGGGCTCGATGATCTTGTTGGACTGGTTGCAGGCAAA 2901 Query 332938 GGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGC 332997 ||| || | ||||| |||| | |||||||||| ||||| || || ||||| | Sbjct 2902 GGCGAATCTGGTCGTGTTGGAGTAGATTTCCATGGTTCGTCGGAGTGCTTGCTGGGCGCC 2961 Query 332998 CGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 || || | || ||| || ||||||||||||| | ||||||||| ||| |||||| Sbjct 2962 CGAGGTCATGCTGTCAGCTTCGTCGAGGATGACCAGCTTGTGGCGGCCGGCCGGCAG 3018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174683459797336