Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7211 134 2e-26 >seq7211 Length=2767 Score = 134 bits (148), Expect = 2e-26 Identities = 576/900 (64%), Gaps = 24/900 (3%) Strand=Plus/Plus Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410 ||| || ||||| || | ||| || ||||| ||| ||| |||||||||||| || || Sbjct 970 GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAA 1029 Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470 || | || || || |||| | |||| || | | ||| | | || || || Sbjct 1030 GGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCAT 1089 Query 69471 TACGGTCTTGTAACGCTT---CTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCA 69525 ||||||| || ||| | | || ||||| | | ||| | |||| ||||| || Sbjct 1090 ---GGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCC--TCGAACTC- 1143 Query 69526 TCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583 ||| ||| | || || ||| || || || || || |||||||| | | ||| || Sbjct 1144 -CTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCAC 1202 Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTC 69643 | | | || || || ||||| || |||||||||||||| ||||| | || || || | Sbjct 1203 CGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGC 1262 Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703 || | || || || || || || || || || ||||| | | ||| | Sbjct 1263 GGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTG 1322 Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763 ||||| || || || || || || | | | || ||||| || || || ||||| || | Sbjct 1323 CGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGA 1382 Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823 ||| | ||||||||| || |||| | ||||| ||| | | ||| || || |||| | Sbjct 1383 CGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCGT 1442 Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCT 69882 | || |||| || ||| || | || || || | | | | || || || || Sbjct 1443 TGGTACCAGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGACGTTCAGGCCGATACCA 1501 Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942 || ||||| || ||||| | ||||| || | || ||||| |||||||| ||||| Sbjct 1502 CCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTG 1561 Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002 || ||| |||||| | || || || |||| ||| | || ||| || ||||| Sbjct 1562 TCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTG 1621 Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA 70062 || | || || || || || ||||| | || || | || ||||| || || | | Sbjct 1622 AAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGTCTCCAGA 1681 Query 70063 GCTGATTCTATATC----CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 | || ||||| || | |||| || | | |||||||| | ||| ||||| Sbjct 1682 ACACGCTCAATATCGTCACCCCAGATG----CCGACAGACACACGCATGATCATGTGCTG 1737 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 || || || || | || || || || | ||||| ||| || ||||| || || Sbjct 1738 GGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAA 1797 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238 ||||| || | |||| ||||| | || || | ||| | || | ||| | ||||| Sbjct 1798 GCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACAATGGCCGAGTCTAGCTCCTCCTT 1857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686630361517920