Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7211 271 9e-68 seq4461 136 5e-27 >seq7211 Length=2767 Score = 271 bits (300), Expect = 9e-68 Identities = 940/1444 (65%), Gaps = 53/1444 (4%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| ||| | |||| || || || || ||||| ||| Sbjct 1740 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTT 1681 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 ||||||| ||| || ||||| |||| | | ||| || || | || ||||||| Sbjct 1680 CTGGAGACCTACAACCTCATGTCGAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTCT 1623 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||| || || || ||||| |||||||| ||| || || |||| Sbjct 1622 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAAAGAGG 1563 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | ||||| |||| ||||| | | ||||| ||||| ||| ||| | Sbjct 1562 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 1503 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | ||||| || || || |||| | | |||| | ||| || || || | Sbjct 1502 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 1443 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | ||| | | ||| |||||||| || || ||| ||| || || || | Sbjct 1442 ACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 1383 Query 104580 TAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| | | ||| || || | || |||| |||||||| |||| Sbjct 1382 TCGACCAGGGTGG-CAAC--AAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGC 1326 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| || | ||||||||||| |||| ||||| || | ||||||| || Sbjct 1325 ACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCG 1266 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 |||||| || ||| |||||||||||||| ||||||||||||||| | || ||| ||| Sbjct 1265 CCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 1206 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812 || | ||| | ||| | ||||| || || || ||||| |||| ||| | || Sbjct 1205 ACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGC 1147 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCG 104866 |||||||| || || |||||| |||||| ||| | | | ||||| ||| | Sbjct 1146 GAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGACCATG 1087 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || |||| || | ||| | || || ||| || | || |||||||| || | Sbjct 1086 AAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAAC 1033 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||||||||| ||| ||| |||| ||||| || || ||||| |||| Sbjct 1032 CCCTTCATGCTTTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACC 973 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| || ||||||||||| || || || | || | | | |||||| ||| Sbjct 972 ATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCCGATGAGGTTGCT 913 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 || || ||||| || || | || || || | || || || || | || || Sbjct 912 GTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGATGCTT 858 Query 105107 GATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 | |||| | || | ||||| || || | |||| ||||| ||||| Sbjct 857 G-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGG 799 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 |||| || || ||||| ||| | ||||| || || ||| ||||||| Sbjct 798 ATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGA 739 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 || |||||| | ||||| |||||||| || |||| ||| || || || || || || || Sbjct 738 CCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CATGCCTT 681 Query 105280 T-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 | || || ||| || || |||| || || || |||||||| || || || | Sbjct 680 TCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTG 621 Query 105339 CTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 | || || || || | || |||| ||| || ||||| || ||||| ||| Sbjct 620 CCCTCACTGCTTCG-GTGC--AGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGG 564 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-- 105453 | ||||| || || | || | || || || || |||| |||| |||| | | || Sbjct 563 GCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCTTCTGA 506 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 | || |||||||| | |||| ||| | |||||||| | || |||| |||||||| Sbjct 505 CCTCTGGGACTGGGAGACCCTCAGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCT 446 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 || | || || ||||| || ||| || | || ||| |||| || || || ||||| Sbjct 445 GCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTT 386 Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 || || ||||| | |||||||| | | | | |||||| || ||||| | | || Sbjct 385 CGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGT 326 Query 105634 CAAC 105637 |||| Sbjct 325 CAAC 322 >seq4461 Length=4022 Score = 136 bits (150), Expect = 5e-27 Identities = 205/286 (72%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 94730 ||||| |||| || || ||||| |||| | | ||| | | ||||| | ||||| | Sbjct 1795 CTCATTGACACCTACATCAAGGAGCCTGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 1737 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || | || || || | ||||| || || ||||| || ||| | | |||| Sbjct 1736 GACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 1677 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | ||| |||||||| |||| ||| |||| ||||| |||||||||||||||||| | Sbjct 1676 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCG 1618 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || |||| | | || | |||||||||||||| || |||||||| || || ||| | Sbjct 1617 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 1558 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 1557 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583024375234720