Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq730 125 8e-24 seq4637 111 2e-19 >seq730 Length=10273 Score = 125 bits (138), Expect = 8e-24 Identities = 419/653 (64%), Gaps = 48/653 (7%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | || | | ||| |||| ||||||| | |||| ||||||||| | Sbjct 651 CATCTTCATTGCAATAGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 592 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660 | | || ||| | ||| ||| ||| || || ||| |||||| |||| Sbjct 591 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 533 Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 | ||| | ||| |||| || || | |||||||||| ||||||||||||||| || Sbjct 532 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 474 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779 |||| |||||| ||| | || ||| | | | || ||| || | ||||| ||| Sbjct 473 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 414 Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839 ||||| | ||||||||| |||||||| || || || || |||||||| | || |||||| Sbjct 413 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 354 Query 145840 TACAGCTGGCAG-------------GAG-----------AGCTCCCCGCCC--------- 145866 || ||||||||| ||| |||| || || Sbjct 353 TAGAGCTGGCAGTGCAGGTGGCCCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGA 294 Query 145867 ------GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 | |||||||||||| | | |||||| || || ||| |||| ||| Sbjct 293 GGGTAGGAGACGTAGAACTGGGCAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGA 234 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTC 145979 || || ||||||||||||| || | || | | | || | ||||| | | || Sbjct 233 TCGGCGGGGTTCCAGGCGGAAAGAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTT 175 Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039 || | || ||||||||| ||||||| ||| ||| || ||||||| || || Sbjct 174 GTGAATAATCTCGGCGAGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAAC 115 Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||| | ||| ||||| ||||| ||||| || || || ||| ||| Sbjct 114 GTACTCGGCGCCAAAGTGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTC 55 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCC 146152 | ||| || ||| | ||||||| || |||| | ||| |||||| Sbjct 54 GCGGTGGTTGAGGCCGAGGTTGTCGAGGAACTCGCGGGGGGCATTGCCGTCCC 2 >seq4637 Length=3674 Score = 111 bits (122), Expect = 2e-19 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 ||||| ||| ||||| ||||| ||||| || || || ||| ||| | ||| || || Sbjct 9 GTGCCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCC 68 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCG 146172 | | ||||||| || ||||| || ||| ||||||||||||||| ||| |||||| Sbjct 69 GAGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCT 128 Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCC 146232 ||| ||| ||||| ||| ||| |||||||||||| ||||| ||| ||| | Sbjct 129 GAG-GCT-GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCG 186 Query 146233 CTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | |||||| | ||||||||| || ||||||| Sbjct 187 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGGGA 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589912839785160