Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq730 125 8e-24
seq4637 111 2e-19
>seq730
Length=10273
Score = 125 bits (138), Expect = 8e-24
Identities = 419/653 (64%), Gaps = 48/653 (7%)
Strand=Plus/Minus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||| | || | | ||| |||| ||||||| | |||| ||||||||| |
Sbjct 651 CATCTTCATTGCAATAGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 592
Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660
| | || ||| | ||| ||| ||| || || ||| |||||| ||||
Sbjct 591 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 533
Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
| ||| | ||| |||| || || | |||||||||| ||||||||||||||| ||
Sbjct 532 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 474
Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779
|||| |||||| ||| | || ||| | | | || ||| || | ||||| |||
Sbjct 473 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 414
Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839
||||| | ||||||||| |||||||| || || || || |||||||| | || ||||||
Sbjct 413 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 354
Query 145840 TACAGCTGGCAG-------------GAG-----------AGCTCCCCGCCC--------- 145866
|| ||||||||| ||| |||| || ||
Sbjct 353 TAGAGCTGGCAGTGCAGGTGGCCCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGA 294
Query 145867 ------GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920
| |||||||||||| | | |||||| || || ||| |||| |||
Sbjct 293 GGGTAGGAGACGTAGAACTGGGCAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGA 234
Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTC 145979
|| || ||||||||||||| || | || | | | || | ||||| | | ||
Sbjct 233 TCGGCGGGGTTCCAGGCGGAAAGAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTT 175
Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039
|| | || ||||||||| ||||||| ||| ||| || ||||||| || ||
Sbjct 174 GTGAATAATCTCGGCGAGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAAC 115
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
|||| |||| || ||||| | ||| ||||| ||||| ||||| || || || ||| |||
Sbjct 114 GTACTCGGCGCCAAAGTGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTC 55
Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCC 146152
| ||| || ||| | ||||||| || |||| | ||| ||||||
Sbjct 54 GCGGTGGTTGAGGCCGAGGTTGTCGAGGAACTCGCGGGGGGCATTGCCGTCCC 2
>seq4637
Length=3674
Score = 111 bits (122), Expect = 2e-19
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114
||||| ||| ||||| ||||| ||||| || || || ||| ||| | ||| || ||
Sbjct 9 GTGCCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCC 68
Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCG 146172
| | ||||||| || ||||| || ||| ||||||||||||||| ||| ||||||
Sbjct 69 GAGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCT 128
Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCC 146232
||| ||| ||||| ||| ||| |||||||||||| ||||| ||| ||| |
Sbjct 129 GAG-GCT-GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCG 186
Query 146233 CTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| |||||| | ||||||||| || |||||||
Sbjct 187 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGGGA 220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589912839785160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |