Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3104 331 1e-85 seq2318 149 6e-31 seq5434 141 1e-28 seq1268 132 5e-26 >seq3104 Length=5293 Score = 331 bits (366), Expect = 1e-85 Identities = 564/805 (70%), Gaps = 17/805 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||||||| | || || Sbjct 1938 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1879 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| ||| | | |||||| ||| || Sbjct 1878 TCCAAGGATCTCCA-CGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTC 1820 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| ||||| ||| |||||||||||||||||||| || |||||||| Sbjct 1819 CCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCG 1760 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||||| ||| | ||||||| || |||||||||||||| |||||| || Sbjct 1759 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1700 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 ||||||| | ||||| || | || ||| |||||| ||||| ||| | | || || Sbjct 1699 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGC-CTG 1641 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | | ||| || | | || |||||||| ||||| || || ||| || |||||| Sbjct 1640 CTCA-ACGAACCTAC--CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 1584 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTG 117046 |||| ||||| | || |||||| | || ||| || |||| | |||| || || Sbjct 1583 CCGACTGGGCCATCCGATGGATC-CAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 1525 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 ||||| || ||||||||||| ||||||| || || ||| |||| || |||||| Sbjct 1524 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 1465 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| || ||||||||||| |||||||| || ||||||||||||||| | |||||| Sbjct 1464 AAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAG 1405 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG 117226 ||||| || ||||||||| || | || | || | | || | ||| | Sbjct 1404 GGTCTTCACACCGACTTTGCATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAGCAAG 1345 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | | || ||| ||| ||||||| || ||| |||| |||||| ||||| ||||| Sbjct 1344 CAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACCGAG 1285 Query 117287 GCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTT 117345 || || || |||| ||||| || | || ||| ||| ||| ||||||||||| Sbjct 1284 GCCCT-CCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGAGTT 1226 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 |||||||||| | || || ||| || | | || ||| |||||| | ||||||| Sbjct 1225 CGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAACCC 1166 Query 117406 GCTGGACTTTATGAACCTCATCTCC 117430 | ||||| ||| | ||||||| Sbjct 1165 CTTCGACTTCATGGAGAACATCTCC 1141 >seq2318 Length=6151 Score = 149 bits (164), Expect = 6e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || |||||||| || || |||||| |||| || || | Sbjct 702 AAGATGCAGATCTTTGTCAAGACCCTCACGGGGAAGACAATCACCCTCGAGGTGGAGTCT 761 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||||||| | || Sbjct 762 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 820 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| |||||||||| || ||||| ||||| || || | |||||||| | |||||| Sbjct 821 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 880 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| ||| || || || || | ||| || | || || Sbjct 881 CAACATCCAGAAGGAGAGCACCCTCCACCTGGTCCTCCGCCTGCGTGGTGG 931 >seq5434 Length=2800 Score = 141 bits (156), Expect = 1e-28 Identities = 140/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 211 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 270 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| |||||||||| ||||| Sbjct 271 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGACTG 330 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| |||||||| || | || ||||| ||||||||||||||||||| Sbjct 331 ATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTTTCCGACTACAACATCCAGAAG 390 Query 40879 G 40879 | Sbjct 391 G 391 >seq1268 Length=8946 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || |||||||| | || || || | | | Sbjct 4993 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCGAGC 5052 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| || |||| ||||| |||||||||||| | ||||| Sbjct 5053 GATACCATTGACAACG-TGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 5111 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||||| |||| || || || |||||||| |||| |||||||| ||||||||| Sbjct 5112 GCAGCGACTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGTCCGACTACAA 5171 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 5172 CATCCAGAAGGAGTCGACCCTTCATCTTGT 5201 Score = 122 bits (134), Expect = 9e-23 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 |||||||| ||||| ||| |||| ||||| || | || | | | | | ||||| Sbjct 4286 ACGGGCAAGACCATTACCCTCGAGGTCGAGTCCTCGGATACCATCGACAATGTCAAGTCG 4345 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| ||||| |||||||||||| | |||||||| || || || | ||| ||||| Sbjct 4346 AAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 4405 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | ||||||||| ||| |||||||||||||||||| | || || || Sbjct 4406 CAGCTTGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCGACCCTCCAC 4465 Query 40894 CTAGT 40898 || || Sbjct 4466 CTCGT 4470 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||||||| | || || ||| | || Sbjct 4765 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 4824 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || || || | ||||| || ||||| || | || || Sbjct 4825 GACACCATTGACAATGTGAAATCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAA 4884 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| || ||||| ||||| || |||| || || |||| |||||||||| Sbjct 4885 CAGCGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAAC 4944 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || ||||| || || Sbjct 4945 ATCCAGAAGGAGTCGACTCTGCACCTGGT 4973 Score = 102 bits (112), Expect = 8e-17 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || ||||| || || || |||||| |||| || || | |||||| Sbjct 4544 TAGTCGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGA 4603 Query 40757 TGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | |||| ||||| || || | || || ||||| || || | |||||||| || Sbjct 4604 TCGACAACG-TCAAGTCGAAGATCCAAGATAAGGAGGGTATTCCTCCTGACCAGCAGCGC 4662 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 || || | ||| ||||| ||||| || || | ||||||||| |||||||||||| ||| Sbjct 4663 CTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGACTACAACATTCAG 4722 Query 40876 AAGGAGGCCACGCTGCATCTAGT 40898 |||||| | || || || || || Sbjct 4723 AAGGAGTCAACACTCCACCTCGT 4745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515076039905040