Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 140 7e-28
seq1287 95.1 3e-14
>seq4231
Length=4255
Score = 140 bits (154), Expect = 7e-28
Identities = 415/632 (66%), Gaps = 21/632 (3%)
Strand=Plus/Plus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| || || ||| ||| || |||||||| ||||||||||||
Sbjct 2442 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 2501
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
|| || || || ||||||||| | ||||| ||| ||||||| || | || ||||
Sbjct 2502 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCAT---CTGGGGTGAC 2558
Query 248938 -ATAGAGAGCGTG--CTCGAGACGTAC-ACCGGA--ATGAGTGAACGCTGGATGACACAT 248991
||| ||||||| || ||||| ||| ||| || ||| || || | || |||
Sbjct 2559 GATATTGAGCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCT---TCACCCAT 2615
Query 248992 GCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTT 249051
||| | || || |||||||| || ||||| | | ||||||| ||| ||||| ||
Sbjct 2616 GCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTG 2675
Query 249052 CTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCG 249108
| | |||| |||| ||| | || || |||||||| || || | |||| ||
Sbjct 2676 GTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCA---AGACCTGTGCC 2732
Query 249109 AAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGT 249168
| ||| || || | ||||| || ||||| || |||| | ||||| || | ||
Sbjct 2733 ATGATCTCCAAGATGGCGGGTGGTATCGGCCTAAACGTCCACCGAATCCGTGCCACTGGC 2792
Query 249169 TCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTT 249228
|| |||||| ||||| || || | | ||| || ||| | ||||| |||
Sbjct 2793 TCTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTC 2852
Query 249229 GAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATG 249285
| ||| ||| ||| | || |||||| || | ||| || | || |||||
Sbjct 2853 AACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATC 2912
Query 249286 TATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGC 249345
|| | || |||||||| ||| | || |||||||| ||| || |||||| |||||
Sbjct 2913 TACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGC 2972
Query 249346 AACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405
|| ||| | | || || ||||| ||| | || ||| | |||| | ||||||
Sbjct 2973 AAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATG 3032
Query 249406 CGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
|| ||| || |||| || ||||| ||
Sbjct 3033 AAGCGTGTCGAGAAGAACGGTGACTGGACCCT 3064
>seq1287
Length=7923
Score = 95.1 bits (104), Expect = 3e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| || ||||||||| || | || || |||||||| ||| ||||||| || || |||
Sbjct 3258 TGCCCCCCTTTCAAGATCATCATTCTCGACGAGGCCGACTCCATGACACAAGATGCCCAG 3199
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321
||| || || |||| |||||||| || | | || || || ||| || | |||
Sbjct 3198 AGCGCACTGCGAAGAACAATGGAGACATACAGCAAGATCACTCGCTTCTGCTTGATCTGC 3139
Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381
||||| || | ||||||| |||||| ||| ||| ||| ||||||||||||||
Sbjct 3138 AACTATGTCACCCGAATCATCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCAAG 3079
Query 254382 ACCCTCG 254388
| |||||
Sbjct 3078 AGCCTCG 3072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073460581598272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |