Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4231 140 7e-28 seq1287 95.1 3e-14 >seq4231 Length=4255 Score = 140 bits (154), Expect = 7e-28 Identities = 415/632 (66%), Gaps = 21/632 (3%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || || ||| ||| || |||||||| |||||||||||| Sbjct 2442 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 2501 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 || || || || ||||||||| | ||||| ||| ||||||| || | || |||| Sbjct 2502 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCAT---CTGGGGTGAC 2558 Query 248938 -ATAGAGAGCGTG--CTCGAGACGTAC-ACCGGA--ATGAGTGAACGCTGGATGACACAT 248991 ||| ||||||| || ||||| ||| ||| || ||| || || | || ||| Sbjct 2559 GATATTGAGCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCT---TCACCCAT 2615 Query 248992 GCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTT 249051 ||| | || || |||||||| || ||||| | | ||||||| ||| ||||| || Sbjct 2616 GCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTG 2675 Query 249052 CTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCG 249108 | | |||| |||| ||| | || || |||||||| || || | |||| || Sbjct 2676 GTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCA---AGACCTGTGCC 2732 Query 249109 AAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGT 249168 | ||| || || | ||||| || ||||| || |||| | ||||| || | || Sbjct 2733 ATGATCTCCAAGATGGCGGGTGGTATCGGCCTAAACGTCCACCGAATCCGTGCCACTGGC 2792 Query 249169 TCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTT 249228 || |||||| ||||| || || | | ||| || ||| | ||||| ||| Sbjct 2793 TCTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTC 2852 Query 249229 GAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATG 249285 | ||| ||| ||| | || |||||| || | ||| || | || ||||| Sbjct 2853 AACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATC 2912 Query 249286 TATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGC 249345 || | || |||||||| ||| | || |||||||| ||| || |||||| ||||| Sbjct 2913 TACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGC 2972 Query 249346 AACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 || ||| | | || || ||||| ||| | || ||| | |||| | |||||| Sbjct 2973 AAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATG 3032 Query 249406 CGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 || ||| || |||| || ||||| || Sbjct 3033 AAGCGTGTCGAGAAGAACGGTGACTGGACCCT 3064 >seq1287 Length=7923 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || ||||||||| || | || || |||||||| ||| ||||||| || || ||| Sbjct 3258 TGCCCCCCTTTCAAGATCATCATTCTCGACGAGGCCGACTCCATGACACAAGATGCCCAG 3199 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 ||| || || |||| |||||||| || | | || || || ||| || | ||| Sbjct 3198 AGCGCACTGCGAAGAACAATGGAGACATACAGCAAGATCACTCGCTTCTGCTTGATCTGC 3139 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381 ||||| || | ||||||| |||||| ||| ||| ||| |||||||||||||| Sbjct 3138 AACTATGTCACCCGAATCATCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCAAG 3079 Query 254382 ACCCTCG 254388 | ||||| Sbjct 3078 AGCCTCG 3072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073460581598272