Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3104 152 7e-32 >seq3104 Length=5293 Score = 152 bits (168), Expect = 7e-32 Identities = 372/558 (67%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 ||||| || ||| ||| ||||||||||| | | || || ||||||||||| || || Sbjct 1382 CATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGG 1441 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| ||||||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 1442 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 1501 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGC-TGTCATGT 50136 || || || || || |||||||| || || | || || | || | | |||| || Sbjct 1502 ATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG 1561 Query 50137 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | || ||||| ||||||||||| | || || || || || ||||| || Sbjct 1562 ATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTT 1620 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| ||| || || | | || || | || || || || | || || | Sbjct 1621 GAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGT 1680 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || || ||||| || || ||||| || |||||||| |||| ||||||| || Sbjct 1681 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGAT 1740 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| || || | ||||| || | | || || || || || |||||| ||| || Sbjct 1741 CTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGC 1800 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCA 50432 || || || | | || | || | |||| || || | | || ||||| Sbjct 1801 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 1860 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | || ||| || |||| ||| | || || | ||||| || || ||||| ||||| Sbjct 1861 GTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTT 1920 Query 50493 TTTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 1921 CTTGTACATCTGCCAGAT 1938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718069220035560