Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4231 390 3e-103 >seq4231 Length=4255 Score = 390 bits (432), Expect = 3e-103 Identities = 1078/1631 (66%), Gaps = 36/1631 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || | | ||||||||| |||| | || ||| |||| || Sbjct 2607 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCA 2666 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | ||||| || || ||| |||||||| | ||| || || |||| Sbjct 2667 TGCTTCCTGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACC 2726 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 ||||| | || ||||||| || || || || || || ||||| | ||||| Sbjct 2727 TGTGCCATGATCTCCAAGATGGCGGGTGGTATCGGCCTAAACGTCCACCGAATCCGTGCC 2786 Query 363726 ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | |||||| ||| || || || ||| || || | |||||||||| Sbjct 2787 ACTGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTC 2844 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| ||||| ||||||||||||||||||| ||||| || || | Sbjct 2845 GTGTCTTCAACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCT 2904 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || || ||||| || || ||| | |||||||| ||||| || || || | Sbjct 2905 TTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGA 2964 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | || || || || |||||| || || ||| || | || | Sbjct 2965 ACCACGGCAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATC 3024 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | ||| | || || |||| || Sbjct 3025 TCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTG 3082 Query 364023 TCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || ||||| |||| || ||||| | | || | | ||||| |||||||||||||| Sbjct 3083 CCCCGGTCTGGCCGACTGCTATGGCGAG--GAGTTCGAGGCTCTTTACGAAAAGTATGAG 3140 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 || ||| |||| ||| ||||| || || |||||||| |||| ||||||| | || Sbjct 3141 AAGGCGGGCAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAG 3200 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 |||||| ||||| || | |||| ||| | ||||| || |||||||||||| | Sbjct 3201 GCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGC 3260 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATA 364259 |||||| || |||| || || | || | || ||| || || ||||||||||| || || Sbjct 3261 AACCAGAAGAACCTGGGCACCA-TCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTA 3319 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | ||| || || ||| ||| || || |||||||| || | || || || |||| | Sbjct 3320 CTGCGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCAT 3379 Query 364320 AA---AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 | | |||| | || | |||| |||| | | | ||||| || | || Sbjct 3380 CAACTACGATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGT 3439 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AG 364428 | |||| || ||| | |||||||| ||| | || || || | ||||| || || Sbjct 3440 TCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAG 3499 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 | || ||||| || || || |||||| ||||||| ||||| || ||||| | ||| Sbjct 3500 C-----AACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTC 3554 Query 364489 ATGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546 | ||||| ||| | || || || || || ||||||| || || ||| |||||| Sbjct 3555 CT--TGCTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCT 3612 Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGA 364605 | || || || || ||| || | ||||||||| ||| | |||| || |||| Sbjct 3613 TCGAGACTATCTACCATGCTGCCCTCACTGCTTCG-GTGCAGCTGGCCAAGGAGGAGGGT 3671 Query 364606 AAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG 364665 ||||| || | |||| || || || |||| | ||||||| || | ||| Sbjct 3672 CCCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGG 3731 Query 364666 AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCAT 364725 ||||| | ||| |||| || ||| ||||||| | || | | || ||| |||| Sbjct 3732 AATGTGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCAC 3791 Query 364726 GGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTC 364785 || | ||||||| || | || || ||||| || || |||| | |||||||| Sbjct 3792 GGCATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTG 3851 Query 364786 GGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCC 364845 || ||||||||||||||||| || | || ||| | || ||||| || || | Sbjct 3852 GGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCT 3911 Query 364846 GGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGG 364905 || || || | ||| || || | || ||||||| ||| ||| || |||||| Sbjct 3912 GGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTGG 3971 Query 364906 GGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGA 364965 || |||||| ||| ||||| |||| || ||||| | |||||||| || Sbjct 3972 TCGGATGCCATGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAAC 4031 Query 364966 TTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTC 365025 | || | || | ||| | | ||||| ||||| ||||| ||||| ||| || Sbjct 4032 ATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGTC 4091 Query 365026 ATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTC 365085 || | ||||| ||||| || ||||| || || |||| |||||| | ||| | | Sbjct 4092 GTTCAGATGGCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCAC 4151 Query 365086 ATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGT 365145 |||| | || ||| | |||| | || |||||| || ||| ||||| ||| Sbjct 4152 ATGAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGC 4211 Query 365146 CTTAAGACAGG 365156 || ||||| || Sbjct 4212 CTGAAGACGGG 4222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302982393083078