Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 194 2e-44
seq1268 116 3e-21
seq2318 113 4e-20
seq5434 98.7 9e-16
>seq4231
Length=4255
Score = 194 bits (214), Expect = 2e-44
Identities = 919/1441 (64%), Gaps = 37/1441 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| || | ||||| ||| || | ||| || ||| | ||
Sbjct 3931 TTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGC 3872
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||||||||||| || | || | || || ||||| || | |
Sbjct 3871 TCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGC 3812
Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
| | | || ||||| | |||||||| ||||| | ||| | || | |||| ||||
Sbjct 3811 AGCAGACTG--TTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCC 3754
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
| || || ||| |||| | |||||||||| |||| | ||| ||||| ||||||
Sbjct 3753 AGAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 3694
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC-TCGCCTCCAGA 145354
||| | |||| ||| ||| ||||| |||| ||| | || ||
Sbjct 3693 AGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGG 3635
Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414
|| | || || |||||| || ||| |||||||| || || ||||
Sbjct 3634 GCAGCATGGTAGATAGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCG 3575
Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474
| ||||||||||| | |||||||| || || ||||| | || || || |||||
Sbjct 3574 AAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGT 3515
Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534
|| ||| ||||||||| | | || | | ||| || | || |||||||||
Sbjct 3514 CGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATC 3455
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
| |||| ||| || || || |||| ||| | || ||||||| | |||||| | | |
Sbjct 3454 CTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATAGCAA 3395
Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654
|| || || | | | | | ||| | || || | || || || || |
Sbjct 3394 GCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACC 3335
Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATGGTT 145711
|| || | | ||| ||| | | ||||||| ||| | ||| ||||| ||||||
Sbjct 3334 TCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTAC---GGATGGTG 3278
Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771
||||| || | ||| || || || | |||||| |||||||||||||||| | || |
Sbjct 3277 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTG 3218
Query 145772 CCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTGC 145828
|| ||||| ||||| ||| | ||| | | | | || | ||| || || ||
Sbjct 3217 CCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGC---TTCTGGGCCTTCA--TGG 3163
Query 145829 TGCTGGTAGC--GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886
| || | | |||| | | || || || ||| || |||| ||| | || |
Sbjct 3162 TCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCAT 3103
Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946
|||| |||| ||| ||||| |||| |||||||||||| || | ||| | ||||| |
Sbjct 3102 AGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCT 3043
Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006
||| |||| ||| || | ||| || | ||| || || | || |||||| || |
Sbjct 3042 CGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGA 2983
Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064
||||| || ||| | || || | ||| | ||| | ||| || ||||||||
Sbjct 2982 CCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCTGCGTGCCA 2925
Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121
|| |||| |||| ||| | ||| || ||| |||||||||||||| |||| ||
Sbjct 2924 GGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCG 2865
Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGA 146181
| ||||||| ||||| || | |||||| ||| ||| ||| ||||| |||
Sbjct 2864 GGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACC 2805
Query 146182 GTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC-GCCGCCGT 146240
|| | ||| || || | | || || || | ||||| ||| ||||| |
Sbjct 2804 AGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTTAGGCCGATACCACCCGCCAT 2745
Query 146241 ACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCTTC 146300
|||||| || ||| ||| ||| || || || || || |||||||| || |
Sbjct 2744 -CTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTT 2686
Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360
||| ||| ||| ||||| ||| ||| ||| | | || || || || ||| | |
Sbjct 2685 TCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGG 2626
Query 146361 TCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCGATAGCGT 146417
| ||| || || || || | ||| |||| |||| | || || || | |
Sbjct 2625 TGGGGGAGGCATGGGTGAAGAATTT---GCTCGACATCAGGTTGTAGGTCTCCAGGACAC 2569
Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477
| ||| ||||| || ||||| | || || ||||||| |||||| ||||| ||||
Sbjct 2568 GCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGGACGCT 2509
Query 146478 C 146478
|
Sbjct 2508 C 2508
>seq1268
Length=8946
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || || || | || | |||||||||||| || ||||||||||||
Sbjct 4489 GCCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 4430
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| ||||| ||||||||||| ||| | || | ||||||||||| || ||
Sbjct 4429 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGG 4370
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || ||| ||||| | || | ||||| | ||||||||
Sbjct 4369 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGAC 4310
Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210
|||| ||||| ||| || || ||
Sbjct 4309 CTCGAGGGTAATGGTCTTGCCCGT 4286
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||| || || | || | ||||||||||| || |||||||| |||||
Sbjct 4991 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 4932
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| ||||||||||| || |||| | ||||| || || |||||
Sbjct 4931 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 4872
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| ||| || | | || | || |||| || || |
Sbjct 4871 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 4812
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || || || ||||| ||||||||
Sbjct 4811 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 4765
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || | ||| | |||||||||||| || |||||||| ||| |
Sbjct 5219 CCGCCACGGAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 5160
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || |||||||| || || |||| | ||||||||||| || |||
Sbjct 5159 AGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGG 5100
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | |||||| | ||||| |
Sbjct 5099 ATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACC 5040
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || ||||| || || || ||||||||
Sbjct 5039 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 4993
Score = 98.7 bits (108), Expect = 9e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| ||||||||||| ||| | |||||| ||||| |||||||||||
Sbjct 4733 GTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 4674
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || | ||||||||||| ||||| || || || || || ||| ||| ||||
Sbjct 4673 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTTG 4614
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || |||| ||||| | |||| ||| | || ||||| || || ||
Sbjct 4613 ACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTC 4554
Query 131218 TTTACGA 131224
|| ||||
Sbjct 4553 TTGACGA 4547
>seq2318
Length=6151
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || | || | ||| |||||| || |||||||| ||||||
Sbjct 931 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 872
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| | ||||||||||| || |||
Sbjct 871 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 812
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 811 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 752
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || || || || || || || || ||||||||
Sbjct 751 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 705
>seq5434
Length=2800
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | ||| || ||||| ||||||||||| ||| |||
Sbjct 391 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 332
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||||| ||||| || || ||||| ||| || ||||| | |
Sbjct 331 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 272
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 271 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 212
Query 131225 AA 131226
||
Sbjct 211 AA 210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471881645343360
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