Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6 140 2e-28 seq3 122 6e-23 seq18892 96.9 2e-15 >seq6 Length=2580 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 298 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 239 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 238 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 204 >seq3 Length=8137 Score = 122 bits (134), Expect = 6e-23 Identities = 88/102 (86%), Gaps = 5/102 (5%) Strand=Plus/Minus Query 25895 TTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTA 25949 || || ||||||||||||||| ||| ||||||||||||||||||||||||| || | Sbjct 6265 TTCTACTAAGCCCGTTCCCTTAGCTATGGTTTCGCTAGATAGTAGATAGGGATAGTGGGA 6206 Query 25950 ATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||| || |||||||||||||||||||| |||| Sbjct 6205 ATCTCGTTAATCTATTTATGCGCGTCACTAATTAGATAACGA 6164 >seq18892 Length=223 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 201 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 142 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 141 GCCCGTATTTAGCCTT 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334856457465299