Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3104 118 1e-21
>seq3104
Length=5293
Score = 118 bits (130), Expect = 1e-21
Identities = 365/561 (65%), Gaps = 9/561 (2%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||||||||| || | ||| ||||| || || || | ||| ||| || || |
Sbjct 1381 GCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAG 1440
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | || || || ||||||||||| || || || ||||| ||| || ||
Sbjct 1441 GCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 1500
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268
||||| || ||||| ||||| || || | ||| | ||||| | || || ||
Sbjct 1501 GATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAA---GGACGAGTTCTTGTC 1557
Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| ||||||| | ||||| ||||| || || || || || | || || || ||
Sbjct 1558 CTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGC 1617
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
||| || ||||| ||| | | | || ||||| || || || | || || ||
Sbjct 1618 GTTGAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTA 1677
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| || || |||| |||||||| || ||||| |||||||| |||| || || |
Sbjct 1678 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGG 1737
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
|||||| || || |||| ||| || || || || ||||| || || || || ||
Sbjct 1738 GATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGC 1797
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564
|| || || || | || || | || | ||| || | | | | || |
Sbjct 1798 AGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTT 1857
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| ||||| || || ||||| | || ||| ||||||| || || || || ||
Sbjct 1858 CCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGC 1917
Query 93625 TTTTTTGTACATATCCCATAT 93645
|| |||||||| | ||| ||
Sbjct 1918 CTTCTTGTACATCTGCCAGAT 1938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556706069265960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |