Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 486 4e-132
seq3104 399 4e-106
>seq4231
Length=4255
Score = 486 bits (538), Expect = 4e-132
Identities = 1164/1737 (67%), Gaps = 49/1737 (3%)
Strand=Plus/Minus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933
|| ||||||||||||| ||| || | ||||| | || || || ||||| ||| |
Sbjct 4148 GATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATC-TGA--AC 4092
Query 243934 GTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAA 243990
| ||| ||| || ||||| | | |||||||||| || ||||| | ||||||
Sbjct 4091 GACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGAT 4032
Query 243991 CCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTT 244050
||||||||| | || || || | | | |||| || | |||| |||
Sbjct 4031 GTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGA 3972
Query 244051 CCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110
||||||||||| | | || ||| || ||| ||| || ||||| ||||| ||
Sbjct 3971 CCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCC 3912
Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170
| || || ||||||||||||| |||| | || ||||||| || ||| |||||||
Sbjct 3911 AGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCC 3852
Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230
||| ||||||| || || ||||| ||||| || | | |||||||||||| | | |||
Sbjct 3851 CAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCC 3792
Query 244231 GTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCG 244290
|||| || || | ||||| | | ||||||||| | | | || ||| | || |
Sbjct 3791 GTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGA-AGG-CTTCACA 3734
Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350
|| ||||||||| ||||| || | |||| | |||| ||||| | ||||
Sbjct 3733 TT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGT 3681
Query 244351 CGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409
| ||||||||| || || |||||||| || | || |||||| || | |||||
Sbjct 3680 GGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGA 3622
Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCA 244469
| |||||||||||| |||||| | || || |||| | | ||| || |||| ||
Sbjct 3621 TAGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCA 3562
Query 244470 TCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGT 244529
| ||| | || || || ||||| || || | || ||||||| ||||||| |||
Sbjct 3561 GAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGT 3502
Query 244530 TGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGC 244589
|| | ||||| | || ||||| ||| ||||||| | | |||| |||||||
Sbjct 3501 TGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGC 3442
Query 244590 GGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGG 244649
| || | | ||||||| || | ||| ||||| || | | | ||| |||
Sbjct 3441 GAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGT 3385
Query 244650 CGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCT 244709
| || ||| || || | ||||| | || ||||||||||| || ||||
Sbjct 3384 AGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCT 3334
Query 244710 CCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCA 244769
| || | | | ||||| || ||||||||||||||| || || |||||||||||
Sbjct 3333 CATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCA 3274
Query 244770 GGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGG 244829
||| || || ||| |||| ||||||| ||||||||||||||||||||| ||||
Sbjct 3273 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGG 3214
Query 244830 TCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAG 244889
||||| ||| || |||||| | | |||||| | | ||||| | ||| |||||
Sbjct 3213 TCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGAC 3154
Query 244890 CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGT 244949
|||||||| | ||| || ||| || ||||||||||| ||| || |||
Sbjct 3153 CCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGG 3094
Query 244950 CTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTC 245008
| || ||||||||| || ||| |||||||| |||| || ||| | || ||| | |
Sbjct 3093 CCAGACCGGGGCACT-CGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGC 3035
Query 245009 TGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCC 245068
| ||||||||| ||||| |||||||| ||| |||| ||||| | || | ||| |||
Sbjct 3034 TTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCC 2975
Query 245069 GAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATG 245128
||| |||||| | ||| || | || |||||||| || ||||||||||||| | |
Sbjct 2974 TTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGG 2915
Query 245129 TAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-C 245187
|||| || | ||| || || ||||||||||| |||||||| || || | || |
Sbjct 2914 TAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGC-AGTGTT 2856
Query 245188 GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247
|||||||| || || | || | ||||| ||| |||||||| || ||||||
Sbjct 2855 GTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTA 2796
Query 245248 GGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGG 245303
| ||| || | | || || | ||||| | ||| | || || || |||||
Sbjct 2795 AGAGCCAGTGGCACGGA--TT--CGGTGGACGTTTAGGCCGATACCACCCGCCATCTTGG 2740
Query 245304 AGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGT 245363
|||| | ||| ||| |||||| || || || ||||| ||||||||| |||||||
Sbjct 2739 AGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGT 2680
Query 245364 TGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGC 245423
|| ||| ||||| ||||||||||| |||| ||| | | | ||||| || ||||||
Sbjct 2679 CGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGG 2620
Query 245424 TGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGT 245483
||| ||||| ||| | |||||| | | ||| |||| || | | || || |
Sbjct 2619 AGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATAT 2560
Query 245484 TGTCGCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG-CG-TC-TCGATG 245539
||| || ||| | | | | || | ||||| |||||||||| || || | ||
Sbjct 2559 CGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATC 2501
Query 245540 GGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTAC 245596
|| || |||||| | |||||| ||||| || |||||||| |||||||||
Sbjct 2500 TTGCCATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTAC 2447
>seq3104
Length=5293
Score = 399 bits (442), Expect = 4e-106
Identities = 615/860 (72%), Gaps = 28/860 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||||||||| ||
Sbjct 1938 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1879
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || ||| ||| |||| |||| ||| ||
Sbjct 1878 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 1821
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || ||||||||||| |||||||||||||| ||||| |||||||| | |
Sbjct 1820 CCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 1761
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||||||||||||||| |
Sbjct 1760 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 1701
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| |
Sbjct 1700 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 1644
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| | | || | | || ||||| ||||| ||||| || ||||||||| |||||||
Sbjct 1643 CTGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 1584
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710
| |||||||| || |||||| || | | | || | | || | || | || ||
Sbjct 1583 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 1525
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770
|||||| | ||||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct 1524 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 1465
Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829
||| || || || ||||| || || ||||| || ||||| |||||| | |||||
Sbjct 1464 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1406
Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888
||| || || | |||||||| |||||||| ||| ||||||| ||| | |||
Sbjct 1405 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 1349
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| || ||| || ||||||||| || ||||| || ||| |||||||||| |
Sbjct 1348 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 1290
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| || | || ||| ||||| ||||||||||| |||||||||| ||||||||
Sbjct 1289 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 1230
Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065
||| ||||||||||| ||||| || ||| | || | || | ||||||| |
Sbjct 1229 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 1173
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| |||||||||||||| | | |||||||||||||| |||||||
Sbjct 1172 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 1113
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| |||| |||||||||
Sbjct 1112 AGCGTGTCGGTGACTACCAG 1093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944076803549040
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