Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3104 277 2e-69 seq2318 125 7e-24 seq1268 125 7e-24 seq5434 114 1e-20 >seq3104 Length=5293 Score = 277 bits (306), Expect = 2e-69 Identities = 568/831 (68%), Gaps = 29/831 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 1112 TTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1171 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||| ||| | |||||| || ||||||| || | |||||| |||||| Sbjct 1172 GTGGCCTTGTAGACCTTCTCGTTGCCGA---GGGCGACGAGGAGGCGGTCGGCGACGAAC 1228 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTC 132800 |||||||| ||| |||| ||| || | || ||||| |||| || || || || Sbjct 1229 TCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCAGGGG-AGGGCCTC 1287 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCC---TAACGCGC-- 132855 ||| || || ||||| |||| ||| || ||||||| ||| ||| | || || Sbjct 1288 GGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTGGATGACCTGCTT 1347 Query 132856 GCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAG 132915 || | || ||||| ||| | || | | | ||| ||||||||| || | Sbjct 1348 GCTG-GCACGGCCCTTG----AGGTGGGAGTGGAGGAGGCATGCAAAGTCGGTGTGAAGA 1402 Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 |||||||| | || ||||| |||||| || |||| ||| ||||||||||| || || Sbjct 1403 CCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTTC 1462 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || |||| ||| || || ||||||| ||||||||||| || || Sbjct 1463 TTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCAAAG 1522 Query 133036 GCCACCAGGCGCTCGCCGAACGTGGC-TTCTT-TGCTGGCGATCCAGCGCAGCGCCCATT 133093 || || || |||| | || | | ||||| | |||| ||||| || | ||||| | Sbjct 1523 GCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG--ATCCATCGGATGGCCCAGT 1580 Query 133094 CGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTT 133153 ||||||| | || ||| || || || || |||||||| || | | || ||| | Sbjct 1581 CGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAG--GTAGGTTCGTTG 1638 Query 133154 CCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTC 133211 ||| | | ||||||||| |||||| ||| || | || ||||| | |||||| Sbjct 1639 AGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTC 1698 Query 133212 CATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAA 133271 ||| ||| || |||||||| ||||| || |||||| | ||| || || ||| Sbjct 1699 CATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTCGCCGCTGAA 1758 Query 133272 ACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTG 133331 |||||||| || || ||||||||||||||||| ||| ||||| ||||| || | ||| Sbjct 1759 TCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCGAGGATGTG 1818 Query 133332 CTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGA 133388 || ||| |||||| | | ||| ||| | ||||||| | |||||||| Sbjct 1819 GGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGGAGATCCTTGGA 1878 Query 133389 CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || || | ||||||| | ||||| || || |||||||| || |||||||| Sbjct 1879 TAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1929 >seq2318 Length=6151 Score = 125 bits (138), Expect = 7e-24 Identities = 163/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || |||||||| || || |||||| |||| || ||| | Sbjct 702 AAGATGCAGATCTTTGTCAAGACCCTCACGGGGAAGACAATCACCCTCGAGGTGGAGTCT 761 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| |||| Sbjct 762 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 820 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | |||||||| | |||||| Sbjct 821 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 880 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || || || |||| || || Sbjct 881 CAACATCCAGAAGGAGAGC-ACCCTCCACCTGGTCCTCCG 919 >seq1268 Length=8946 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||||||| | || || || | || Sbjct 4765 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 4824 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | ||| || |||| ||||| || || ||||| | || ||| Sbjct 4825 GACACCATTGACAATGTGAAATCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAA 4884 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || ||||| ||||| || |||| || || |||| |||||||||| Sbjct 4885 CAGCGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAAC 4944 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||| ||||| |||| || ||| || | || || Sbjct 4945 ATCCAGAAGGAGTCGACTCTGCACCTGGTTCTTCGTCTGCGCGGTGG 4991 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 |||||||| ||||| ||| |||| |||||| || | || | | | | | | || Sbjct 4286 ACGGGCAAGACCATTACCCTCGAGGTCGAGTCCTCGGATACCATCGACAATGTCAAGTCG 4345 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || || | ||||| ||||| || ||| ||||||| ||||| || |||| ||| ||||| Sbjct 4346 AAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 4405 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||| || || | ||||||||| ||| ||||||||||| ||||| |||| || || Sbjct 4406 CAGCTTGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCGACCCTCCA 4464 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || |||||||| | || || ||| | | | Sbjct 4993 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCGAGC 5052 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| || ||| | ||||| Sbjct 5053 GATACCATTGACAACG-TGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 5111 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || |||||||| |||| |||||||| ||||||||| Sbjct 5112 GCAGCGACTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGTCCGACTACAA 5171 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || ||| | || || ||| | | ||||| Sbjct 5172 CATCCAGAAGGAGTCGACCCTTCATCTTGTTCTCCGTCTCCGTGGCGG 5219 Score = 102 bits (112), Expect = 8e-17 Identities = 135/185 (73%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||| || || || |||||| |||| || ||| | |||||| Sbjct 4544 TAGTCGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGA 4603 Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | |||| | || || |||| || || ||||| ||||| | ||||| ||||| Sbjct 4604 TCGACAACG-TCAAGTCGAAGATCCAAGATAAGGAGGGTATTCCTCCTGACCAGCAGCGC 4662 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 || |||| ||| ||||| ||||| || || | ||||||||| |||||||||||| || Sbjct 4663 CTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGACTACAACATTCAG 4722 Query 38430 AAGGA 38434 ||||| Sbjct 4723 AAGGA 4727 >seq5434 Length=2800 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 211 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 270 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 271 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGACTG 330 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| |||||||| || | || ||||| ||||||||||||||| ||| Sbjct 331 ATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTTTCCGACTACAACATCCAGAAG 390 Query 38433 G 38433 | Sbjct 391 G 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500033820735360