Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2891 282 5e-71
>seq2891
Length=5131
Score = 282 bits (312), Expect = 5e-71
Identities = 477/683 (70%), Gaps = 16/683 (2%)
Strand=Plus/Minus
Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467
||| || || ||||| ||||| | | ||||| || ||| | ||||| || ||
Sbjct 3693 CTTGTGCTTGCGTTTGAACTCATTAACAAAGTGGTTAACGAGACGGTTGTCGAAGTCCTC 3634
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||| ||| || || || ||||| | ||||| || |||||||| | |||||| |
Sbjct 3633 ACCACCCAGGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 3574
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| | ||||||||| || ||||||||||| || || || ||||| ||||| ||| |
Sbjct 3573 CAGGAGCGAAACATCGAAAGTACCACCACCAAGATCGAAGATGAGAACGTTGCGCTCGCC 3514
Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647
|| | ||||| ||||||||||| || || || || || || ||||| || || || ||
Sbjct 3513 CTCAATCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGTTCGTTGATGATTCG 3454
Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGT 7706
||| ||| ||||||||||| | ||| ||||| || || || || || || || ||||
Sbjct 3453 GAGAACGTTGAGGCCAGCAAT-GAGGCCGGCATCCTTGGTGGCCTGGCGCTGGGAGTCGT 3395
Query 7707 TAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCG 7766
| |||||||| ||||| || ||||| |||| |||| ||| || || || || || |
Sbjct 3394 TGAAGTAGGCGGGGACAGTGACGACAGCGTTGTTGACGGTCTCGCCAAGGTAGGACTCGG 3335
Query 7767 CGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCG 7826
|| | ||| ||| ||||| || ||||| || || ||||| || | | || || | |
Sbjct 3334 CGGTCTCTCGCATCTTGGTGAGGACCATGGAGGAGATCTCCTCGGGGGTGAA-GGTCTTG 3276
Query 7827 TT-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGGGATAACC 7882
|| || || || || ||||| || || | ||| || || |||| | ||| | |
Sbjct 3275 TTCTCGCCCTTGAACTCAACCTCGATGACGGGCTT----GC--CACCCTTGTCGATGATC 3222
Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942
|| | | | | ||||| ||| | || |||| |||| | ||||| | |||||
Sbjct 3221 TTGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCAGGGTCGGCGAACTTGCGACCGATC 3162
Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002
|| ||||| || || || || ||||| | |||||||||||| |||||||| || ||
Sbjct 3161 AGGCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCA 3102
Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062
|| ||||| ||||| || | || || || ||||| | || || || ||||| ||
Sbjct 3101 TCACCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAAGAGGGAGTGGTTCGGTTA 3045
Query 8063 CCTTGGTCGTTCGCAATAATTTC 8085
|| |||||||| || || || ||
Sbjct 3044 CCCTGGTCGTTGGCGATGATGTC 3022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634956320412360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |