Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 444 1e-119
seq3104 206 5e-48
>seq4231
Length=4255
Score = 444 bits (492), Expect = 1e-119
Identities = 1237/1864 (66%), Gaps = 94/1864 (5%)
Strand=Plus/Minus
Query 212574 GCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCG 212630
|| ||||||| || || || ||||||||||| ||||| ||||| ||| |||||||
Sbjct 4252 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTT---CCAGCCG 4196
Query 212631 TGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAG 212689
| |||||| |||| ||| |||| | || | |||| | | ||||
Sbjct 4195 GCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGTGGGGTCCTTCATGTGG----- 4148
Query 212690 ATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTAT 212749
| ||| |||||||| ||| || ||||| | | | ||| || ||||| | |
Sbjct 4147 ----ATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAAC 4092
Query 212750 GATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAA 212809
|| | | ||| || | |||||| ||||||||| ||| | |||| || | ||||
Sbjct 4091 GACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGAT 4032
Query 212810 GCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CATGTCCT 212865
| |||||||||||| | || || || | | | || | | | | |||| | |
Sbjct 4031 GTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCATGGCAT 3976
Query 212866 CGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGT 212925
| ||| |||||| || | ||| ||||| ||| |||||||| | |||||| |
Sbjct 3975 CCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACT 3916
Query 212926 CACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGT 212985
| || | ||| || | | |||||| | ||| || ||||| ||||||| || ||||||||
Sbjct 3915 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 3856
Query 212986 TCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCA 213045
| ||||| ||||| | ||| ||||| || ||||| || || | ||| |||||||| | |
Sbjct 3855 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 3796
Query 213046 CTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC 213104
|||||||| || | || || | ||| |||||||||| | |||| |||
Sbjct 3795 TGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCT-CCCAGTCCCAGAGGTCAGA-AGG--- 3741
Query 213105 TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGGGCTGCC 213160
|||||| ||||||||||| ||||| | || || |||| |||| |||
Sbjct 3740 -----CTTCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGGAGAGCC 3690
Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCAGGGCAG 213219
|| | | | ||||||||| || | |||||||||||||| ||| || || |||||||
Sbjct 3689 CTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAG 3631
Query 213220 CGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGG 213279
| | |||||| || || || |||| | ||||||||| ||||| || ||| ||| |
Sbjct 3630 CATGGTAGATAGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAG 3571
Query 213280 GCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGT 213339
|||| || |||| ||||||| || |||||||| || | || ||||||| ||
Sbjct 3570 GCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGT 3511
Query 213340 GTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTG 213398
||| || ||| ||| |||| ||| | ||||| ||| |||||| ||| ||
Sbjct 3510 GTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTG 3452
Query 213399 TTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAG 213458
|| |||||||| | | || | ||||| | | || ||| || ||| | |||
Sbjct 3451 TTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAGTCATAG 3398
Query 213459 C------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCC 213512
| | ||| | | ||| ||||||||| | || |||||||| || ||
Sbjct 3397 CAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCA 3338
Query 213513 ACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTG 213572
||||| | || | | |||||| || ||||||||||| || ||| || |||||||||
Sbjct 3337 ACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTG 3278
Query 213573 CCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGA 213631
|||||||||| ||| ||| ||||| | |||| ||||||||||||||| |||||
Sbjct 3277 CCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTT 3219
Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACC 213689
|||||||| ||| | | | || | |||| |||||| | | |||||| ||
Sbjct 3218 GCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT---CATG 3164
Query 213690 CGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCC 213749
| || | | | || ||| |||| |||||| || | | ||| || | |||
Sbjct 3163 GTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCA 3104
Query 213750 CAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATC 213808
|| | |||| || || || ||||||||||||| ||||||| ||| || ||
Sbjct 3103 TAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTC 3044
Query 213809 TCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCT 213868
|| ||| | || |||||| || || || | ||| || || ||||||||| | || |
Sbjct 3043 TC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCG 2985
Query 213869 CCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCA 213928
||| ||| || ||| |||||||| || || || ||||||| || ||||||||
Sbjct 2984 GACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCA 2925
Query 213929 CGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCT 213985
||||| | ||||||||||||||| || | || | ||||| |||||||| || ||
Sbjct 2924 GGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCG 2865
Query 213986 GGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCC 214045
||| ||||||||| || || | ||| | |||||||| |||||||| ||
Sbjct 2864 GGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACC 2805
Query 214046 CGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGC 214102
|| || || ||||| | ||| | | ||| | | | || || || ||||| ||
Sbjct 2804 AGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTTAGGCCGATACCACCCGC 2748
Query 214103 GTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162
||||||||||||||| ||| | | | ||| || || || | |||||||| ||
Sbjct 2747 CATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTC 2688
Query 214163 TGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAG 214222
| | | || | || |||||| || ||||| ||| || | |||| ||||| ||
Sbjct 2687 TTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAG 2628
Query 214223 CGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGA 214282
|||||| ||||||| | | || ||| | || | || ||||||||||||||||
Sbjct 2627 GGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACG 2568
Query 214283 GGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGGGCCTCT 214341
|| |||| ||| | || | || | ||| | |||||||||||| | ||
Sbjct 2567 CTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCT 2509
Query 214342 CTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAA 214398
| | || ||| | |||||| |||||||| ||||| ||||||||||| ||||
Sbjct 2508 C-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAA 2452
Query 214399 AGTA 214402
||||
Sbjct 2451 AGTA 2448
>seq3104
Length=5293
Score = 206 bits (228), Expect = 5e-48
Identities = 487/729 (67%), Gaps = 11/729 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 1093 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1152
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 1153 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 1211
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || |||||| |||||||||| | ||||||| | ||||||||| | ||||
Sbjct 1212 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 1271
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | |||| || || ||||||| ||| || ||||| || | || |
Sbjct 1272 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 1331
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| | | || || || | || | | | | || | ||| | ||| ||||
Sbjct 1332 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 1388
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||| | || ||||| || ||||||| ||||||| ||| || |||||||
Sbjct 1389 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 1448
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || ||||||||||| || | || || | || ||||||||| ||||
Sbjct 1449 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 1508
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || ||| ||| | || | || || | ||||||||| ||||||
Sbjct 1509 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 1568
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
| |||||||| |||||||| |||||| || || ||||| ||||| |||||| |
Sbjct 1569 GGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT 1628
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | | | | | ||| | ||||| | |||| ||| | ||| |||| |
Sbjct 1629 AGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 1685
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | |||||| | ||| |
Sbjct 1686 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 1745
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || | ||||| ||| | || ||||| ||||| || || || || ||||| ||||
Sbjct 1746 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 1805
Query 48555 AGGCAAGGA 48563
|||| ||||
Sbjct 1806 AGGCGAGGA 1814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931273961967360
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