Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 266 6e-66
seq3104 203 6e-47
>seq4231
Length=4255
Score = 266 bits (294), Expect = 6e-66
Identities = 845/1281 (66%), Gaps = 53/1281 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| |||||||| |||||||| ||||| |||||| ||||||||| ||| | ||||||||
Sbjct 3640 GTGAGGGCAGCATGGTAGATAGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 3582
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
||| ||| ||||| ||||| | | ||||| | || || || ||||| || || | |
Sbjct 3581 AGACTCGAAAGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGACCCTGGACACCAACA 3524
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||||| | ||||| | ||| ||||| | || || || ||| |
Sbjct 3523 CCAATGGGTCGGTGTCGCATGTTGCTGTTGCGA--GCTTCCGTAACAGGGTAGTGGTTCA 3466
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
||||||| | |||| ||||| || || || | || ||| || |||||||
Sbjct 3465 CGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGA 3406
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
| | | ||| | | |||| || | | || || || ||||| |
Sbjct 3405 AGTC--ATAGCAAG----CATCATCGT--AGTTGATGAACGAAGGC----AGGGCCAGAG 3358
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
|| ||||| || || || ||||| || | | |||| || ||||| || ||||
Sbjct 3357 AAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGA 3298
Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCC 221830
| ||| || |||||| ||||||| || || || |||||| ||| ||| | |||
Sbjct 3297 GATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGTCC 3239
Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
||||||||||| ||||| ||| ||||| ||| ||| | || || | ||||||
Sbjct 3238 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGC 3179
Query 221891 TCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCG---GTCTTTTCATACCCG--GTAT 221945
| ||||| || | | ||||| ||||| | | ||| |||||| |||
Sbjct 3178 T-TCTGGGCCTT--CATGGTCTTGCG---ACCCTTGCCCGCCTTCTCATACTTTTCGTAA 3125
Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005
||||| | | |||| || || || ||| |||| || || ||| | ||||||||
Sbjct 3124 AGAGCCT--CGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACA 3067
Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065
| || |||||| ||| | | ||| | || ||||||||| || || ||||| || |
Sbjct 3066 TGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAG 3007
Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125
|| | || || || | || || ||||||| ||||| ||| || | ||| || | |
Sbjct 3006 CCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGA 2947
Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185
||||||| | || |||||||| ||||| || |||| ||| | || || ||||||||||
Sbjct 2946 ACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGT 2887
Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244
|||||||||| || | | | | ||| | |||||||| ||||| | || |
Sbjct 2886 TGCCACCCTGGTCGA-CGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACA 2828
Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304
|||||||| ||||||||| || ||||| | || ||| | || | | ||
Sbjct 2827 CCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCAC---GGATTC-GGTG 2772
Query 222305 GAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
||| | |||||||||||| || || ||||||||||| ||| |||||||||| ||
Sbjct 2771 GACGTTTAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 2712
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
|| ||||| || |||||| || | || | ||| || || || |||| |||||
Sbjct 2711 ATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGG 2652
Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480
| || | || || || || || ||||| ||| || || ||| | || |||||
Sbjct 2651 CTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACAT 2592
Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATC 222539
||| | ||| ||||| | ||| | | || | ||| ||| || | | | | || |
Sbjct 2591 CAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-C 2533
Query 222540 TCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC--TGGAGAGCAGGTACGA 222597
|||| ||||| |||||| | ||| ||| | | | | | | ||| ||||| ||
Sbjct 2532 GCATGATCATGTGCTGGGGACGCTCAACA--ATCTTGCCATCAATCTTGAGGAGGTAGGA 2475
Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657
| || ||||||||||| |||||||| | | | ||||| | | | | || | |||
Sbjct 2474 TCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACAATGGC 2415
Query 222658 GGCGTCCAGCTCCGACTTGTG 222678
| ||| |||||| ||||||
Sbjct 2414 CGAGTCTAGCTCCTCCTTGTG 2394
Score = 104 bits (114), Expect = 4e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | ||
Sbjct 3932 GTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGG 3873
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||||||||||||||| | || ||||| || ||||| || || |
Sbjct 3872 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAG 3813
Query 221236 CAGCAGACTGTTGCG 221250
|||||||||||||||
Sbjct 3812 CAGCAGACTGTTGCG 3798
>seq3104
Length=5293
Score = 203 bits (224), Expect = 6e-47
Identities = 560/857 (65%), Gaps = 24/857 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | ||| |||||| ||||| |||||||||||
Sbjct 1938 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1879
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || || | ||||||||| || ||
Sbjct 1878 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGACGAGCAGTTCTTCGTCTC 1820
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | | || ||||| || |||||||| || || || |||||||| || |||| |
Sbjct 1819 CCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCG 1760
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
||||| | | || || ||| | |||||| || |||||||| |||||||| ||
Sbjct 1759 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1700
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769
|| || | ||||| ||| || | ||| || || || ||||| | ||
Sbjct 1699 GGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGCC 1643
Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
|| | || || || ||||| ||| ||| ||| ||||| | ||||||
Sbjct 1642 TGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGGC 1583
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
|||||||| |||||| | | ||| | | | |||| |||| || || ||
Sbjct 1582 CGACTGGGCCATCCGATGGATCCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGTCGC 1523
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
||||||||| || ||||| ||||| ||||||||| | ||||| ||||||||||||||||
Sbjct 1522 CTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 1463
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || |||||| || ||| ||||||||||||||||||| | ||||||||
Sbjct 1462 GAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGG 1403
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC--T 26067
||| |||| || ||||| ||||| ||| || | |||| ||| | | | |
Sbjct 1402 TCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCAC---CTCAAGGGCCGTGCCAG 1349
Query 26068 CAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126
|||| || | || | ||||||| || || || || ||| ||||||| |
Sbjct 1348 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1289
Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186
| ||||||||| | ||||||| || ||||| ||
Sbjct 1288 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1229
Query 26187 GTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244
|| || ||||||| || || || ||| || || || | |||||| | |
Sbjct 1228 GTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAGGTCTACAAGGCCACC 1171
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
||||| |||||||| ||||| ||||| || | | || |||||||||||||| || |||
Sbjct 1170 AACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAG 1111
Query 26305 AGGGTCGGCGACTATCA 26321
| ||||| ||||| ||
Sbjct 1110 CGTGTCGGTGACTACCA 1094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928586708861760
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