Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3104 141 3e-28 seq3448 132 1e-25 seq4231 122 3e-22 seq2118 87.8 5e-12 >seq3104 Length=5293 Score = 141 bits (156), Expect = 3e-28 Identities = 247/354 (70%), Gaps = 4/354 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| ||||| ||| || || | ||||| |||||| || ||||| || || | Sbjct 1736 CCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 1677 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423 | || || ||||| || |||||||| || | | || | | || || | |||||| Sbjct 1676 ACTCGCTCCTCATTGACACCTACATCAAGGAGCCTGCTCA-ACGAACCTACCTCTTCAAC 1618 Query 133424 GCCATTAGCGAATTTCCT-TGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCA 133482 |||||| | || ||| || || ||||| | |||||||| || ||||||||| Sbjct 1617 GCCATT-GAGACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCA 1559 Query 133483 GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttt 133542 ||||||| || |||||| |||||||| || ||||||| || ||||| || || Sbjct 1558 GGACAAGAACTCGTCCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTT 1499 Query 133543 tttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602 ||||| ||||| || ||| || || ||||| || |||||||| | | ||||| || Sbjct 1498 CTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCT 1439 Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 | ||||| ||||| || || || | ||||||| ||||||||||| ||||| Sbjct 1438 GACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 1385 >seq3448 Length=5504 Score = 132 bits (146), Expect = 1e-25 Identities = 193/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||| | | ||||| | || |||||||| ||||| || | || || || || Sbjct 2358 GTCTTCAAGAGCCTTGACCAGTCGTCGCTGAATGTAACCCGTCTCGGCGGTCTTGACCGC 2417 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 |||||||| ||||| | |||||| |||| || |||||||| | ||| || || Sbjct 2418 GGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTGAG 2477 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | | ||| |||| ||||||||||| || |||||||| | ||| |||||| Sbjct 2478 ACCACGAAGATACGAGTTCTCGACGAAACCACGGGCTTCGGGCGAGTAATCGTCCTTGGT 2537 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || | || || | ||| | || |||||||| || || ||| |||| Sbjct 2538 GAAATGAGGCAGCGTGCGGTACTTGAATCCGAAGGGAATACGCTTGCCTTCGACGATCTG 2597 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||| | | | ||||||||||||| || Sbjct 2598 CTGTCCGACAAGGGCAGTCATCTGCGAAATGTT 2630 >seq4231 Length=4255 Score = 122 bits (134), Expect = 3e-22 Identities = 565/885 (64%), Gaps = 19/885 (2%) Strand=Plus/Minus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||| ||| || | |||||| ||| || || || || ||||||||| | ||||||| Sbjct 3324 CGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCT 3265 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || | ||| || |||||||| || ||| | ||| | || ||||| ||| Sbjct 3264 GGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCT 3205 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || |||||| | |||| || || |||| |||| Sbjct 3204 GCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCG 3145 Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863 || |||||| |||| || | ||| | | | ||||| || || || || ||| || Sbjct 3144 CCTTCTCATACTTTTCGTAAAGAGCCTC--GAACTCCTCGCCATAGCAGTCGGCCAGACC 3087 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCAT 155920 ||||||| | ||| || | || | ||| | || || ||| |||||| ||| Sbjct 3086 GGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGA---CACGCTTCAT 3030 Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980 || | ||| ||| | ||| ||| ||||| | || |||||| | ||| Sbjct 3029 GAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCC 2970 Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040 ||| ||||| || || || | ||| || | ||| | || ||||| || || || Sbjct 2969 GTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGAT 2910 Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097 ||||| |||| | |||| |||||||| || || ||||| ||||| || ||||| Sbjct 2909 GGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAA 2850 Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAAC 156156 ||||| ||||| || | | ||| ||||| || || ||||| || ||| || | || | Sbjct 2849 GACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCG-ATGTAAGAGC 2791 Query 156157 CAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGA 156215 ||| | || | || | | ||| || |||||||| | |||| || || || Sbjct 2790 CAGTGGCACGGATTCGGTGGACGTTTAGGCCGATACCACCCG-CCATCTTGGAGATCATG 2732 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || || ||| | ||||| ||||||| ||||| || |||| ||| | || Sbjct 2731 GCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGG 2672 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 |||| || | ||||| | || || ||||| ||||| || || || | ||||| Sbjct 2671 AAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGG 2612 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGACCC 156394 | || | || | ||||| | ||| |||||| | ||||| || |||| Sbjct 2611 GTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCC 2552 Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454 | || | || ||| || | ||| ||| ||||| |||||||| |||||| ||||| Sbjct 2551 CAG-ATGCCGACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATC 2493 Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||| || ||||| | || || ||||| || || || || || Sbjct 2492 AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTA 2448 >seq2118 Length=7067 Score = 87.8 bits (96), Expect = 5e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAA-GCGAGA 251483 || || ||||| | | | ||||| || | ||| | || || ||||| ||| ||| | Sbjct 949 CAGACGTGGACTCGGAAGGCATCCGACACCTCAAACAGACGCTCCTTGAGGAAAGCGGCA 1008 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 || ||||| | |||||| |||||||| ||||| || ||||| || ||||||||||| || Sbjct 1009 -GCTCCGTGGGCAATCATGCAATCACGTTCCATCTCTCCGAATCGCAGACCACCATCTCG 1067 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGT 251570 || | ||| ||| | ||||| ||||| Sbjct 1068 GGCACGACCTTCGACGGGCTGGCGAGT 1094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471398413009173