Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7045 156 5e-32 seq3104 156 5e-32 seq4231 129 7e-24 seq2493 125 9e-23 seq955 120 4e-21 seq1967 107 2e-17 seq3448 93.3 5e-13 >seq7045 Length=1413 Score = 156 bits (172), Expect = 5e-32 Identities = 230/326 (71%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 18100 GGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCA 18159 |||||||| ||||| | ||| |||||||||||| | || || ||| | Sbjct 1086 GGCGAGTCCCACGGCAAGTCAGTCTCGTGCATCATCGACAACTGCCCCCCCAACATTGCC 1145 Query 18160 CTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTT 18219 || ||||||||||||||||||| ||| | | || ||||| ||||||||| || | Sbjct 1146 CTCACCGAGGCCGACATCCAGCCCCAGCTCAACCGCCGCCGCCCGGGCCAGTCGGCCATC 1205 Query 18220 TCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTC 18279 | ||||| || ||||| ||||| |||| |||||| |||||||| ||||||||| || Sbjct 1206 ACGACGCCCCGGAACGAAAAGGATCGTGTCACCATCCACTCGGGCACCGAGAACGGCGTC 1265 Query 18280 ACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTAT 18339 || |||||| | || || |||| || ||||| |||||||||||| ||||| Sbjct 1266 ACCCTCGGCACCCCGATCCTCCTCACCGTCCCCAACGAGGACCAGCGGCCCAAGGACTAC 1325 Query 18340 TCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATGGCC 18393 ||||| | || | ||||| ||| |||||||||| |||||| ||| Sbjct 1326 GGCGACAAGACCATCGACCTCTACCCGCGCCCCAGCCACGCCGACTGGACCTACCTGGAA 1385 Query 18394 AAGTACGGCATCAAGGCGTCGTCGGG 18419 ||||||||| ||||||| ||||| || Sbjct 1386 AAGTACGGCGTCAAGGCCTCGTCCGG 1411 >seq3104 Length=5293 Score = 156 bits (172), Expect = 5e-32 Identities = 214/291 (74%), Gaps = 15/291 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| ||||| ||||| ||||||||||| ||||| Sbjct 1402 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 1461 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296 ||||||||| ||||||| | | || || ||| ||| ||||| ||||||||||| ||| Sbjct 1462 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCA 1519 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353 ||| ||| ||| |||| |||||| | |||| | |||| | |||||| || Sbjct 1520 AAGGCGACGAGACGCTGAGCAAAG--GACGAG----TTCTTGTCCTGGATCCATCGGATG 1573 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTC 869412 |||||||||||||| || | | | || | || || |||||| ||||||| ||| Sbjct 1574 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTT 1633 Query 869413 CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || || || ||||||| |||||||| || |||||||| |||||||| Sbjct 1634 C-GTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTC 1683 Score = 154 bits (170), Expect = 2e-31 Identities = 185/250 (74%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 1088 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 1147 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| ||||| | || Sbjct 1148 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACG 1207 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || |||||||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 1208 AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGC 1267 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | |||| ||| ||||| | ||| || |||||| ||| |||| Sbjct 1268 AGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATG 1327 Query 868931 ATCTGCCTGG 868940 || | ||||| Sbjct 1328 ATGT-CCTGG 1336 >seq4231 Length=4255 Score = 129 bits (142), Expect = 7e-24 Identities = 299/448 (67%), Gaps = 17/448 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || |||| ||| ||||| || |||||||| || |||||||| Sbjct 2879 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 2820 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || || | ||| | ||| | ||| || | ||| || | ||| Sbjct 2819 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTTAGGCC 2760 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || ||| ||||||||| | || || ||||| || || || || ||||| Sbjct 2759 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 2700 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| | |||||||| || || ||||| || || || || || | || || Sbjct 2699 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 2640 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || |||||||| ||||| | || |||||| || | | |||||| || |||||| Sbjct 2639 AGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGT 2580 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || || ||| | | |||||| |||| || ||||| | || Sbjct 2579 CTCCAGGACACGCTCAA---TATCGTC-----------ACCC-CAGATGCCGACAGACAC 2535 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| |||||| ||||| || | ||| | |||| |||||||| Sbjct 2534 ACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 2475 Query 1630485 CCGGCGCATG-GTCATGAGGCCAAAGTA 1630511 | || || | ||| ||| ||||||||| Sbjct 2474 TC-GCTCAAGAGTCTTGAAGCCAAAGTA 2448 Score = 113 bits (124), Expect = 6e-19 Identities = 288/443 (65%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| || ||||||||||| || |||| | ||| | || |||||||||| ||||||| Sbjct 3318 ACTCGATAATCTCGGTGCAGAGATTGGAGCTACG-GATGGTGCCCAGGTTCTTCTGGTTG 3260 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | ||||| | |||||||| ||||||| |||| |||||||||| |||||||| Sbjct 3259 CTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCC 3200 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340 ||| |||||| |||||| || | || || | | || | |||| Sbjct 3199 TCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCGCCTTC 3140 Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400 || || || |||| ||||| ||| ||| ||||| | Sbjct 3139 TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCAC 3080 Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCG---CGGCGCATAAAGAGG 1628457 ||| ||||| | ||| | ||||| ||||| || | || || ||| ||||| Sbjct 3079 TCGTTGGGACACATGAGGGTCCAGT---CACCGTTCTTCTCGACACGCTTCATGAAGAGA 3023 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || |||| || || || |||||||| || ||| ||||||||||||||||||| Sbjct 3022 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 2963 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || ||||| || | || | | || |||||||| ||||| |||||| ||||||| Sbjct 2962 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 2903 Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600 || || |||||| ||| || Sbjct 2902 GCACCAGGTCGCTTGTTGCCACC 2880 Score = 86.0 bits (94), Expect = 8e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 1627293 CGTCCACAGGCCGCGCGCCATCA-GGCGCTTGACCAGGTGGCGGTTGACCACGGTAAAGT 1627351 || ||||||||| | | || || || ||||| ||| | ||||||| || || | Sbjct 3974 CGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACT 3916 Query 1627352 CGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCGGTGT 1627411 |||| | ||| || |||||| |||||||||| |||| |||| | |||| ||| Sbjct 3915 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 3856 Query 1627412 TGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTGCGCA 1627471 |||||||||||||||| || |||| || ||||| | || | || || |||||| | Sbjct 3855 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 3796 Query 1627472 GGCCGTGCT 1627480 |||||||| Sbjct 3795 TGCCGTGCT 3787 >seq2493 Length=5875 Score = 125 bits (138), Expect = 9e-23 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| ||||||| |||||||||||||| || || ||| | || |||||| | || |||||| Sbjct 2556 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 2615 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| ||||||||||| || ||||| || ||||||| Sbjct 2616 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 2664 >seq955 Length=9345 Score = 120 bits (132), Expect = 4e-21 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| | || ||||||| |||| ||||||||| || ||||||||||||| || ||| || Sbjct 1868 AAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGC 1927 Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165 | || |||| |||||||| || || || |||||||||| || |||||||||| Sbjct 1928 ATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGACC 1987 Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225 | || ||| | || |||||| ||| | | |||||||| |||| ||| || ||| Sbjct 1988 AGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGATGC 2047 Query 1574226 GCCATTCTG 1574234 ||||| ||| Sbjct 2048 GCCATCCTG 2056 >seq1967 Length=7544 Score = 107 bits (118), Expect = 2e-17 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 19055 CGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTT 19114 ||||||||| || || ||||| || || ||||| | |||||||||||||| ||||| Sbjct 1 CGGCGGCACCGTCACCTGCGTCATCCGTAATGTGCCCTCTGGCCTCGGCGAGCCCTGCTT 60 Query 19115 TGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATT 19174 |||||| | |||||| ||||| ||||||||| |||| ||||| ||| ||||| || Sbjct 61 CGACAAGCTGCAGGCCGTCCTCGCACACGCCATGATGTCCATCCCCGCCGTCAAGGCCTT 120 Query 19175 CGAGATTGGCAGCGGGTTTGCGGGTGC 19201 ||| ||||| ||| ||| ||| || Sbjct 121 TGAGTTTGGCTCCGGCTTTCTGGGCGC 147 >seq3448 Length=5504 Score = 93.3 bits (102), Expect = 5e-13 Identities = 257/386 (67%), Gaps = 16/386 (4%) Strand=Plus/Minus Query 511949 GGCGTGGACGCCTCGCGCAGTCACACCAACGACATCAACCGCGTGGCCGCCGTGCTGGGC 512008 ||||| ||||| ||||| | ||||||||||| | | |||| || ||| | || Sbjct 917 GGCGTCGACGCTTCGCGGACATACACCAACGACCTGTGGCAAGTGGTCGAGGTGTTTGGT 858 Query 512009 ATCGAGGCCGCCGTGGCCGTGCTCTTTTCC--GAGATCAAGGCCGTCATCTCCTTTGACG 512066 |||||||| ||| | || ||||| || ||| | | ||| | | ||||||| Sbjct 857 ATCGAGGCAGCCC-GTTCG-GCTCTGGTCAAGGAGTTGACCAACGTGCTGGCGTTTGACG 800 Query 512067 GCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGCCGCGGAT 512126 | ||||||||||| | || ||| |||||||| || || |||| | | | |||| Sbjct 799 GTTCCTACGTCAACCATCGTCACATTGCGCTGCTGACAGATGTCATGACGTACAGAGGAT 740 Query 512127 CGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGCGCCGACCACGGCTTC-CTGTCGCGG 512185 | | ||| || || || ||||| ||||||| || || ||| | | | ||| ||| Sbjct 739 CCATCTCGGCTGTGACCCGACACGGTATCAACCGTGCTGA-CACTGGTGCTCTGATGCGT 681 Query 512186 GCCTCTTTCGAAGAGACCGTCGACATCCTCTTTGACGCGGCGGCCTTTGCCGAGACCGAC 512245 |||||||| ||||| ||||| ||| | | || || || || | || | || | | Sbjct 680 TGTTCTTTCGAGGAGACGGTCGAGATCTTGCTCGAGGCTGCCGCGTCTG--GTGAGCTAG 623 Query 512246 AAGATCACCGACG--GCTCGGTGACCGAGCCCATCATCCTGGGCCAGACGGCGCCCATCG 512303 | || |||| | ||||| || || |||| |||||||||| |||||| || | Sbjct 622 ATGACTGCCGAGGTATCTCGGAGAACG------TCATGCTGGGCCAGATGGCGCCAATGG 569 Query 512304 GCACGGCCATCTCGGACGTGCTCGTG 512329 |||||| | || || |||||| || Sbjct 568 GCACGGGTAACTTTGATGTGCTCCTG 543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105314984161593