Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3104 188 1e-41
seq955 141 1e-27
seq2493 125 1e-22
seq2229 113 7e-19
seq4231 100 5e-15
seq3448 91.5 2e-12
>seq3104
Length=5293
Score = 188 bits (208), Expect = 1e-41
Identities = 243/331 (73%), Gaps = 11/331 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| |||||
Sbjct 1402 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 1461
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||||| || || || || ||| ||||| ||||||||||| ||
Sbjct 1462 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 1518
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
|||| ||||||| |||| ||||| | | | || | | |||||| || ||
Sbjct 1519 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 1575
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575
||| || ||||| || | | |||| | || || |||||| ||||||| ||| |
Sbjct 1576 CCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 1635
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
| | | || ||||||| ||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1636 TTGAG-CAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 1694
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || || |||||||||||| || |||||
Sbjct 1695 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 1725
Score = 147 bits (162), Expect = 3e-29
Identities = 190/259 (73%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| |||||| |||||||||||||| ||||
Sbjct 1081 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 1140
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA- 794010
||||| |||||| | ||| ||||||| | | |||| ||||||| ||||
Sbjct 1141 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 1200
Query 794011 -GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
|||||| || ||||||||||||||||| || |||||||| ||||||| ||||||||
Sbjct 1201 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 1258
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
||||||| || || ||| || | |||| | | ||||| | ||| || ||||||
Sbjct 1259 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 1318
Query 794130 TCGATGATGATCTGCCTGG 794148
||| ||||||| | |||||
Sbjct 1319 TCGGTGATGATGT-CCTGG 1336
>seq955
Length=9345
Score = 141 bits (156), Expect = 1e-27
Identities = 188/260 (72%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240
||||||| || ||||||| |||||||||||||| || |||||||||| || || |||
Sbjct 1866 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 1925
Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300
|| | || |||| |||||||| || |||||| |||||||||| ||| |||||||||
Sbjct 1926 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 1985
Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360
| | || || | ||||||||| ||| | | ||||||| |||| || || |
Sbjct 1986 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 2045
Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420
|||||||| || | | || | || || |||||| ||| ||| ||| |||
Sbjct 2046 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 2105
Query 2019421 TTATCGACGCCGAAAAGGTC 2019440
||||||| || |||||||||
Sbjct 2106 TTATCGAGGCGGAAAAGGTC 2125
>seq2493
Length=5875
Score = 125 bits (138), Expect = 1e-22
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| ||||||
Sbjct 2556 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 2615
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| || || ||||| || |||||||
Sbjct 2616 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 2664
>seq2229
Length=7065
Score = 113 bits (124), Expect = 7e-19
Identities = 80/92 (87%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | |
Sbjct 895 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 836
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||||||||| || | |||||||||||| ||||
Sbjct 835 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 804
>seq4231
Length=4255
Score = 100 bits (110), Expect = 5e-15
Identities = 177/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| ||||| || |||||||| | ||||||||
Sbjct 2879 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 2820
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | ||| || | ||| || | |||
Sbjct 2819 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTTAGGCC 2760
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || ||| ||||||||| | || || | || || || || || || |||||
Sbjct 2759 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 2700
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| | |||||||| | ||| ||||| || || || || | | || ||
Sbjct 2699 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 2640
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| |||||
Sbjct 2639 AGCATTGAAGAGGGTGGG 2622
Score = 98.7 bits (108), Expect = 2e-14
Identities = 336/515 (65%), Gaps = 14/515 (3%)
Strand=Plus/Minus
Query 2069277 GGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTCTTGAGGCCGCGACGCCACGCGTA 2069336
|||||||| | | || ||||| ||||||||||| ||||| |||||| | ||| ||
Sbjct 4253 GGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGC 4194
Query 2069337 GGCGTGCATCGACGTGATGGACTCGGCATTCGGGACGGCA--CA-GTAGAGGTTGAGCGA 2069393
|||||| ||||| || | | | | | | | || || || |||||| ||
Sbjct 4193 AAAGTGCATGCTGGTGAT---CTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGA 4137
Query 2069394 CTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCATGTCGATGGTCACGCGGTTGGA 2069453
|||| ||| || | ||| | |||||||| ||||| | | | | ||| | ||
Sbjct 4136 CTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGA 4077
Query 2069454 CACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCGGCGGCACCTCGTCGTCATCAAA 2069513
| |||||| ||||||||| | |||||||||| | |||||| | | | ||
Sbjct 4076 AATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCT-CGGCGGGGA-TGTTGGGGAT---- 4023
Query 2069514 GCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCC 2069573
| ||| | || || | | | || |||| |||| | | | || |||||||||
Sbjct 4022 GTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCC 3963
Query 2069574 GCGCGCCATCATGCGC-TCGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCA 2069632
| | || || | | | || ||| | ||||||| || || ||||| | ||| |
Sbjct 3962 -CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGA 3904
Query 2069633 CGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCT 2069692
| |||||| |||||||||| ||| |||| | |||| |||||||||||||||
Sbjct 3903 CACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCT 3844
Query 2069693 GCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGCCGTACTGTC 2069752
|||| || |||| || ||||| | || | ||||| |||||| | ||||| ||
Sbjct 3843 GCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCT 3784
Query 2069753 GCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGG 2069787
||| || ||| ||| |||||||||||| ||
Sbjct 3783 TGACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGG 3749
Score = 96.9 bits (106), Expect = 5e-14
Identities = 281/433 (65%), Gaps = 8/433 (2%)
Strand=Plus/Minus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642
||||||||| || |||| | | | ||||||||||||||| ||||||||| | |||
Sbjct 3308 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 3250
Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702
|| | |||||||| |||||| |||| || |||||| |||||||| || |||||
Sbjct 3249 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 3190
Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759
| |||| | | | || || |||| | || | ||||
Sbjct 3189 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 3133
Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819
| || || || || | |||| | ||| ||| ||| ||||| |||| |
Sbjct 3132 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 3073
Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879
| || | ||| | |||||| ||| || | || || ||| || || ||| |||
Sbjct 3072 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 3013
Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939
| || | || || ||||| || ||| ||||||||||||||||||||| |||||
Sbjct 3012 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 2953
Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999
| || | || | || || |||||||| ||||| |||||| ||||||||| || |
Sbjct 2952 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 2893
Query 2072000 GCTTGCCGCCGCC 2072012
||||| ||| ||
Sbjct 2892 GCTTGTTGCCACC 2880
>seq3448
Length=5504
Score = 91.5 bits (100), Expect = 2e-12
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692
|||||||| || |||||| |||| || ||||||||||||| || || || ||||||
Sbjct 3500 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 3441
Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737
|||||||||||||| |||||| ||| | | ||||| ||||||
Sbjct 3440 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 3396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7913881799883531
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