Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4231 315 7e-81 seq3104 156 4e-33 seq2318 131 2e-25 seq1268 120 3e-22 seq5434 116 4e-21 >seq4231 Length=4255 Score = 315 bits (348), Expect = 7e-81 Identities = 1135/1751 (65%), Gaps = 51/1751 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109 |||||| ||| |||||||| || || ||||| || ||||| | || || | |||| Sbjct 4138 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTG- 4080 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||||| | |||||||| || ||||| | |||| ||| | |||| Sbjct 4079 --CGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATG 4022 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || ||| | |||| || | || ||| | |||| | ||| Sbjct 4021 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCC 3962 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | || | ||||| | || ||| | | || || ||||| |||||||| ||||| || Sbjct 3961 ATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 3902 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || || || ||||||||||||||| |||||| Sbjct 3901 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 3842 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | || | || || ||||| || | |||||| |||||| | ||| | | || Sbjct 3841 GAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTG 3782 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 | | | | || | ||||||||||||| || || |||| |||||||||||| Sbjct 3781 ACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTCG 3722 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 |||| ||||| || ||||| ||||| | | | | ||| || || | | || Sbjct 3721 AACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCC 3662 Query 148530 GCCGCCAGTTCGCAGCTC-GCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 ||||| | ||| | || ||| || | | ||| || |||||| || ||| | Sbjct 3661 TTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATAGTCTCGAAGATCTGCTT 3603 Query 148589 GTTGAGCA---GCGCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 ||||||| | ||| | | | | ||| | ||||| ||||| | || || | Sbjct 3602 GTTGAGCTCACGAGCCTCGGGAGAC----TCGAAAGGCATGCGCAGAGCAAGGAAAGCAT 3547 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| ||||| || || || |||||||| |||||| |||||| | ||| || Sbjct 3546 CAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTT 3487 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764 | | || |||||||| |||||| ||| ||| || ||||| || || |||| || Sbjct 3486 CCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTG 3427 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TAC--GATGCATCGGTTCA 148818 | | | ||| | | || || || | | ||||| || |||| | || Sbjct 3426 TGACGTCGTGCAACTTCTGGAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCA 3367 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 ||| | ||| || || ||||| || || |||||| ||||||| |||||| | |||| Sbjct 3366 GGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCT 3307 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 ||| ||| |||||| || ||| ||||| |||||| || |||||||||| ||||| Sbjct 3306 CGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 3247 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AA 148996 | ||||||||| |||||| | || ||| || || ||||| || | ||| | Sbjct 3246 AGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCAT 3187 Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTA 149050 | | || | ||| || ||| || || | |||||||| ||| ||| || Sbjct 3186 ACCAG--AGCTTCTGGGC-----CTTCATGGTCTT-GCGACCCTTGCCCGCCTTCTCATA 3135 Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 | ||| | |||| |||||| ||||||| ||||| ||| | ||||||||||||| | Sbjct 3134 CTTTTCGTAAAGAGCC--TCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCG 3077 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | || |||||||| | ||| | |||| | | || |||||||| || |||||||| Sbjct 3076 TTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 3017 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | |||||| || | |||||||| || | || || ||| ||| |||| Sbjct 3016 ATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGC 2957 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 |||| || | || | || |||||||| ||||||| ||| | || | || || Sbjct 2956 AGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCA 2897 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 ||| ||||| ||||||||||||| || | ||||||| || || |||| ||| Sbjct 2896 GGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATG 2837 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCAC 149404 || | || ||| || ||||| ||| ||| ||| | ||| || || | Sbjct 2836 GGGGTGACACCGTTGGAGGTACCGTTGGTACCAGC-GATGTAAGAGCCAGTGGCACGGAT 2778 Query 149405 TTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGA 149463 | ||| ||||| | |||||| || ||||| | ||| ||||| || ||| || Sbjct 2777 TCGGTGGACGTTTAGGCCGATACCACCCGCCAT-CTTGGAGATCATGGCACAGGTCTTGA 2719 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 | || || || ||||| |||||||| |||||| | ||| ||||| ||| ||| Sbjct 2718 GAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACA 2659 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT-C 149582 || || | || || || ||| | ||||||| ||| || || || |||| | Sbjct 2658 GCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGC 2599 Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642 | | ||||| | ||| | ||| || || || || || || || || |||||| | Sbjct 2598 TCG-ACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACA 2540 Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702 | || ||||| | ||| ||||| || ||||| | | ||| |||| ||||| | | Sbjct 2539 GACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGG 2480 Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCA 149762 ||| || || |||||| |||||||||||| ||| | ||||| ||| | | | || Sbjct 2479 TAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACA 2420 Query 149763 ATGGCGGCGTC 149773 ||||| | ||| Sbjct 2419 ATGGCCGAGTC 2409 >seq3104 Length=5293 Score = 156 bits (172), Expect = 4e-33 Identities = 351/523 (67%), Gaps = 17/523 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 1093 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1152 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || || ||| | ||| | ||||| || Sbjct 1153 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACGAGGAG 1212 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||| ||||||| |||| | ||||||||||| |||| || Sbjct 1213 GCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGC 1272 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | ||| || | ||||||| ||||||| || || || ||| ||| | Sbjct 1273 GCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTC 1332 Query 120591 GAGCATAG------TG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 | || || |||| ||| |||| | | | | || | || | ||| Sbjct 1333 CTGGATGACCTGCTTGCTGGCACGGCC-CTTGAGGTGG----GAGT---GGAGGA--GGC 1382 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | |||||||| ||||| || |||||||| || || || ||||||||| ||| ||||||| Sbjct 1383 ATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 1442 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 | ||||||| ||| | |||||| |||| |||| ||||||| || ||||| | Sbjct 1443 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 1502 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 ||||| ||| ||||||||||| | |||| || || | || ||||| | || Sbjct 1503 TACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGA 1562 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 |||| |||||||| |||||||| ||||| | ||| || || Sbjct 1563 TCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGAT 1605 >seq2318 Length=6151 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 902 GGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 844 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| |||||||| |||||| || Sbjct 843 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 784 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||| || || || || || | Sbjct 783 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGG 724 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 723 TCTTGACAAAGATCTGCAT 705 >seq1268 Length=8946 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| |||| | || || || |||||||||||||||| Sbjct 4961 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 4904 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||| || || ||||| |||||||||||||| |||||| | Sbjct 4903 CGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATT 4844 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | ||||| || | ||||| ||| || ||||| || | Sbjct 4843 TCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGGG 4784 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 4783 TCTTGACGAAGATCTGCAT 4765 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||| ||||||||||| Sbjct 4733 GTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 4675 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||| || || ||||| || |||||| ||| Sbjct 4674 GGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTT 4615 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | |||||| |||| ||||| || || || || || || Sbjct 4614 GACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGT 4555 Query 133643 TTTTACGA 133650 || |||| Sbjct 4554 CTTGACGA 4547 Score = 109 bits (120), Expect = 5e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||||||| | ||| | | | ||||| |||||||||| Sbjct 4459 GGTCGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 4401 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 4400 CGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACT 4341 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | || || | || ||| || |||| ||| | ||| ||||| |||| Sbjct 4340 TGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGTCA 4284 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| ||| || ||| ||| ||| || |||| Sbjct 5196 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCTTCCAGCT 5138 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || ||||||||||| || |||||||| |||||||| |||| Sbjct 5137 GCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCT 5078 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| || ||| | | |||||| || | |||| ||| || || | Sbjct 5077 TGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGTGATGGTCTTTCCAG 5018 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || || |||||||| Sbjct 5017 TGAGAGTCTTGACAAAGATCTGCAT 4993 >seq5434 Length=2800 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || |||||||| |||||| Sbjct 356 TCCTCCAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 297 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | || ||| || |||| ||||| | Sbjct 296 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 237 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 236 GTCTTGCCCGTCAGGGTCTTCACGAAA 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483286475487960