Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4231 134 2e-26 >seq4231 Length=4255 Score = 134 bits (148), Expect = 2e-26 Identities = 629/987 (64%), Gaps = 30/987 (3%) Strand=Plus/Minus Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA-TATTGTATTA 69325 ||| || | ||| || || || || || || ||||||| || ||| || | || | Sbjct 3368 CAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC-GCAGTACTCGATAA 3310 Query 69326 TCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTT 69382 |||| || || ||||| |||| ||| || ||||| || | ||| || ||||| Sbjct 3309 TCTCGGTGCAGAGATTGGAGCTACG---GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGC 3253 Query 69383 TGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAA 69442 ||| ||| ||||||||| || || || || | || || || |||| | |||| | Sbjct 3252 GGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA 3193 Query 69443 TAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCAT 69499 | | | ||| | | || || || ||||||| || ||| | | || |||| Sbjct 3192 TGGCATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCAT 3136 Query 69500 ATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACAT 69555 | | | ||| | |||| ||||| || ||| ||| | || || ||| || || || Sbjct 3135 ACTTTTCGTAAAGAGCC--TCGAACTC--CTCGCCATAGCAGTCGGCCAGACCGGGGCAC 3080 Query 69556 TCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCG 69615 || || |||||||| | | ||| || | | | || || || ||||| || |||||| Sbjct 3079 TCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCG 3020 Query 69616 GGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttt 69675 |||||||| ||||| | || || || | || | || || || || || || Sbjct 3019 GGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTG 2960 Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735 || || || ||||| | | ||| | ||||| || || || || || || | | | Sbjct 2959 CGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCA 2900 Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795 || ||||| || || || ||||| || | ||| | ||||||||| || |||| | ||| Sbjct 2899 CCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGC 2840 Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855 || || | | ||| || || |||| || || |||| || ||| || | || || Sbjct 2839 ATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGG 2780 Query 69856 ATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTC 69915 || | ||| || || || || ||||| || ||||| | ||||| || Sbjct 2779 ATTCGGTGGACGTTTAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTG 2720 Query 69916 AATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC 69975 | || ||||| |||||||| ||||| || ||| |||||| | || || || ||| Sbjct 2719 AGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGAC 2660 Query 69976 ATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTT 70035 | ||| | || ||| || ||||| || | || || || || || ||||| |||| Sbjct 2659 AGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTG 2600 Query 70036 TCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAATTCC 70091 || | ||| ||||| || || | | || ||||| || | |||| || Sbjct 2599 CTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATG----CC 2544 Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151 | | |||||||| | ||| ||||| || || || || | || || || || | Sbjct 2543 GACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAG 2484 Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211 ||||| ||| || ||||| || || ||||| || | |||| ||||| | || || Sbjct 2483 GAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATA 2424 Query 70212 AATAATAACAGAATTTAGTTTATCCTT 70238 | ||| | || | ||| | ||||| Sbjct 2423 GACAATGGCCGAGTCTAGCTCCTCCTT 2397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686717933803560