Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 134 2e-26
>seq4231
Length=4255
Score = 134 bits (148), Expect = 2e-26
Identities = 629/987 (64%), Gaps = 30/987 (3%)
Strand=Plus/Minus
Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA-TATTGTATTA 69325
||| || | ||| || || || || || || ||||||| || ||| || | || |
Sbjct 3368 CAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC-GCAGTACTCGATAA 3310
Query 69326 TCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTT 69382
|||| || || ||||| |||| ||| || ||||| || | ||| || |||||
Sbjct 3309 TCTCGGTGCAGAGATTGGAGCTACG---GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGC 3253
Query 69383 TGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAA 69442
||| ||| ||||||||| || || || || | || || || |||| | |||| |
Sbjct 3252 GGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA 3193
Query 69443 TAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCAT 69499
| | | ||| | | || || || ||||||| || ||| | | || ||||
Sbjct 3192 TGGCATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCAT 3136
Query 69500 ATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACAT 69555
| | | ||| | |||| ||||| || ||| ||| | || || ||| || || ||
Sbjct 3135 ACTTTTCGTAAAGAGCC--TCGAACTC--CTCGCCATAGCAGTCGGCCAGACCGGGGCAC 3080
Query 69556 TCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCG 69615
|| || |||||||| | | ||| || | | | || || || ||||| || ||||||
Sbjct 3079 TCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCG 3020
Query 69616 GGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttt 69675
|||||||| ||||| | || || || | || | || || || || || ||
Sbjct 3019 GGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTG 2960
Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735
|| || || ||||| | | ||| | ||||| || || || || || || | | |
Sbjct 2959 CGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCA 2900
Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795
|| ||||| || || || ||||| || | ||| | ||||||||| || |||| | |||
Sbjct 2899 CCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGC 2840
Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855
|| || | | ||| || || |||| || || |||| || ||| || | || ||
Sbjct 2839 ATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGG 2780
Query 69856 ATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTC 69915
|| | ||| || || || || ||||| || ||||| | ||||| ||
Sbjct 2779 ATTCGGTGGACGTTTAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTG 2720
Query 69916 AATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC 69975
| || ||||| |||||||| ||||| || ||| |||||| | || || || |||
Sbjct 2719 AGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGAC 2660
Query 69976 ATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTT 70035
| ||| | || ||| || ||||| || | || || || || || ||||| ||||
Sbjct 2659 AGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTG 2600
Query 70036 TCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAATTCC 70091
|| | ||| ||||| || || | | || ||||| || | |||| ||
Sbjct 2599 CTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATG----CC 2544
Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151
| | |||||||| | ||| ||||| || || || || | || || || || |
Sbjct 2543 GACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAG 2484
Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211
||||| ||| || ||||| || || ||||| || | |||| ||||| | || ||
Sbjct 2483 GAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATA 2424
Query 70212 AATAATAACAGAATTTAGTTTATCCTT 70238
| ||| | || | ||| | |||||
Sbjct 2423 GACAATGGCCGAGTCTAGCTCCTCCTT 2397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686717933803560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |