Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 212 8e-50
>seq4231
Length=4255
Score = 212 bits (234), Expect = 8e-50
Identities = 1114/1753 (64%), Gaps = 43/1753 (2%)
Strand=Plus/Minus
Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413
|||| | ||| || |||||||| || ||||| || || | ||||| || | |||
Sbjct 4246 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 4187
Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471
|| | || |||| ||| || || | |||| || ||| | ||| ||||
Sbjct 4186 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT-- 4129
Query 110472 GGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCC 110531
| ||||||||| || || | || ||||| | || ||| | | | ||| ||||
Sbjct 4128 GATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCC 4069
Query 110532 AAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAAC 110591
| || || ||||| ||||| || | ||||| | | ||| |||||||||||||
Sbjct 4068 AGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAAC 4009
Query 110592 CCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651
| | | | || | | ||||| | | ||||| || || || | ||||
Sbjct 4008 CGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGT 3949
Query 110652 CATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGA 110711
| |||| || |||||| | ||||| || |||||| | | | ||||||
Sbjct 3948 CCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGA 3889
Query 110712 TGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTG 110771
|||| | ||||| || || ||||| || || || |||| ||| || | || ||| |
Sbjct 3888 TGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAG 3829
Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831
| ||||| || || | || |||||||| |||| || | |||||||| | ||| |||
Sbjct 3828 TAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGA 3769
Query 110832 GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC 110889
| |||||||| || | || || ||||| |||| ||||||| ||||| || |
Sbjct 3768 GGTTCTCCCAGTCCCAGAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAAT 3711
Query 110890 CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT- 110948
|| | || |||||||| |||| ||||| |||| ||| | | | |||| |
Sbjct 3710 ACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTG 3651
Query 110949 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 111008
||| | || |||| || || || || || || ||||| | || | |||
Sbjct 3650 CACCGAA-GCAGTGAGGGCAGCATGGTAGATAGTCTCGAAGATCTGCTTGTTGAGCTCAC 3592
Query 111009 TGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTG 111066
|| || || || ||| || | ||| || | || || |||| || ||||| ||
Sbjct 3591 GAGCCTCGGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTG 3534
Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126
||||| | |||||| |||| ||||||||| || || || || | ||| || ||
Sbjct 3533 GACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTA 3474
Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186
|| ||| || | | ||| || || |||| || ||||| || || |
Sbjct 3473 GTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAA 3414
Query 111187 TTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGA 111243
|| | | ||| | || || || || | ||| || || ||||| | ||
Sbjct 3413 CTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGA 3357
Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303
|| | ||||| ||||| |||||| | |||||| | ||| || || || |
Sbjct 3356 AGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAG 3297
Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363
||||| || || || |||| ||||| ||||| ||||| |||||| |||||
Sbjct 3296 ATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTT 3237
Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422
|||||||||| |||| | || ||||| ||||| | | ||| || || | ||| | | |
Sbjct 3236 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTT 3177
Query 111423 CGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGG 111479
| | | || |||| ||| | || | ||| || ||| |||||| ||| || |
Sbjct 3176 CTGGGCCT----TCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAG 3121
Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538
| || |||||||| ||| || ||||| ||||| || || || ||||| | ||
Sbjct 3120 CCTCGAACTCCTC-GCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGG 3062
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
| ||| | ||| | ||| || ||||||||||| || || |||||||| || |
Sbjct 3061 GTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGG 3002
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
|| || || | || |||| || | || ||||| || | |||||||||||
Sbjct 3001 AACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCA 2942
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGC 111712
| || ||| |||||||| |||||||| |||| || | || || ||| | |
Sbjct 2941 AAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG- 2885
Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772
||| | || | || || || || ||| ||| || || |||||||| || | | |||
Sbjct 2884 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCG 2825
Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832
| || ||| || || || || ||| | |||| | | |||| ||
Sbjct 2824 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTT 2765
Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892
| || ||||| || ||| ||| ||||| ||||| | | ||||| |||| |||
Sbjct 2764 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 2705
Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952
|| | || |||||| || || ||| |||||||| ||||| ||| || ||
Sbjct 2704 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 2645
Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGT 112010
|||||||||||||||||||| || | || || |||| | | || |||||| ||
Sbjct 2644 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 2587
Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070
||| ||||||| |||| ||||| || || || |||||||| | || |||||||
Sbjct 2586 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 2527
Query 112071 ACATGTACTGTGG 112083
||||| ||| ||
Sbjct 2526 TCATGTGCTGGGG 2514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627857493458400
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