Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4231 259 5e-64 seq2043 152 6e-32 seq3104 104 3e-17 >seq4231 Length=4255 Score = 259 bits (286), Expect = 5e-64 Identities = 504/737 (68%), Gaps = 38/737 (5%) Strand=Plus/Plus Query 53233 GCGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCC 53289 |||||||| ||||| ||| || | ||| ||| || | ||| || || ||| | || Sbjct 2567 GCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAA---TTCTTCACCCATGCCTCCCC 2623 Query 53290 AACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGAT 53349 ||||| ||||| |||||||| || |||||| |||| ||||||||||| | || Sbjct 2624 CACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACAT 2683 Query 53350 GAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAA 53409 ||| || ||| || || || || || || || |||||| |||||| |||||||| Sbjct 2684 GAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAA 2743 Query 53410 GTGGTCGGGTGGTATCGG--TA----TCCACTGCTCGAACGTCCGTGCGAACGGCACACC 53463 | | ||||||||||||| || ||||| |||| ||||||| | ||| | Sbjct 2744 GATGGCGGGTGGTATCGGCCTAAACGTCCAC----CGAA--TCCGTGCCACTGGCTCTTA 2797 Query 53464 AATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAA 53523 ||| || || ||||| | || | || || || ||||| || ||||||||||| Sbjct 2798 CATCGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAA 2857 Query 53524 CACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCT 53583 ||| |||||||||||| |||||||||| ||||| || | || ||||||||||| Sbjct 2858 CACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCT 2917 Query 53584 CGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGA 53643 ||||| |||||||| || | | ||||| || || ||||| ||| || || | || Sbjct 2918 TGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGA 2977 Query 53644 AGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAA 53703 ||| | ||| ||| |||||||| ||||| |||||||| || ||||||||| | Sbjct 2978 GGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCG 3037 Query 53704 GGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGG 53762 || |||||| ||| || ||| ||| ||||| || |||||||||||||| || | | Sbjct 3038 TGTCGAGAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGA 3097 Query 53763 GTGTCTACGGTGAGGAGT---------TTAACGAGATGTATCGGACGTACGCAGTTCAGG 53813 || ||| || ||||||| || |||| | |||| || | | || | ||| Sbjct 3098 CTG-CTATGGCGAGGAGTTCGAGGCTCTTTACGAAAAGTAT--GA-GAAGGCGGGCAAGG 3153 Query 53814 GCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGG 53873 | ||| |||| | ||||| | || | ||| |||| |||||| || ||| Sbjct 3154 GTCGC------AAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGA 3207 Query 53874 TGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGA 53933 ||||| || | || | |||| ||||||||| |||| ||||||||||||| Sbjct 3208 CCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGA 3267 Query 53934 AGAACATCGGCGTCATC 53950 ||||| | ||| |||| Sbjct 3268 AGAACCTGGGCACCATC 3284 Score = 105 bits (116), Expect = 7e-18 Identities = 553/860 (64%), Gaps = 52/860 (6%) Strand=Plus/Plus Query 55096 TGACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCAT 55155 |||||| | ||| | ||||| || || | ||||| ||| ||||||||| || | || Sbjct 3401 TGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGGATTAT 3460 Query 55156 CGACAAGAATTACTACCCG---ACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCC 55212 |||| ||| ||||||| || ||||| ||||| |||| | || ||||| || Sbjct 3461 CGACGTGAACCACTACCCTGTTACGGAAGCT---CGCAACAGCAACATGCGACACCGACC 3517 Query 55213 CATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGAT--TGCCCTTC 55270 ||| | | ||||| ||||| | || || ||| | ||||| | |||| ||| Sbjct 3518 CATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCTTTC 3575 Query 55271 GACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGC 55329 || || ||||| || | ||| || | |||||| || | |||||| ||| || Sbjct 3576 GAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACT-ATCTACCATGCTGC 3634 Query 55330 GCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTC 55389 ||| | ||| || ||||| | | ||||| ||||| || ||| | || Sbjct 3635 CCTCACTGCTTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 3694 Query 55390 GCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGG---GGCAAG---TCTGACCCCAT 55443 || || |||| ||||||||||||| | ||| | ||| ||||||| | Sbjct 3695 TCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTGAAGCCTTCTGACCTCTG 3754 Query 55444 G---TTTGACAAGTTGA---AGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCT 55497 | | || || | | |||| | || | | ||| | |||||| ||||| Sbjct 3755 GGACTGGGAGAACCTCAGGGAGCAGGTCAAGGA---GCACGGCATTCGCAACAGTCTGCT 3811 Query 55498 CGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGA 55557 | || || ||||| || || || | |||||| |||||||||||||| ||||| Sbjct 3812 GCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTTCGA 3871 Query 55558 GCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAA 55617 ||| ||||| |||||||||||| |||||| ||| || || ||||| || | || Sbjct 3872 GCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTC--CAGG-TCGT 3928 Query 55618 CAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAG--ATCAAG 55672 ||| | | || |||||||||| | || | |||| | | | || || Sbjct 3929 CAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTGGT--CGGATGCCATGAAA 3986 Query 55673 A--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCTCTGCGTC 55727 | || || |||| |||||| ||| ||||||| || | ||| | || Sbjct 3987 AACCGAATCATTGCCGAGAACGGT---TCCATCCAGAACATCCCCAACATCCCCGCCGAG 4043 Query 55728 -TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA---AGAGTCTGATTGACATG 55783 |||||| | ||| ||| || ||||||||| | ||| || ||| || | ||| Sbjct 4044 GTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAG-GTCG--TTCAGATG 4100 Query 55784 AGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAAT 55843 ||| || || ||||| | ||| || ||||||||||| || |||||| |||| || | Sbjct 4101 GCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCACATGAAGGAC 4160 Query 55844 CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 || | ||| |||| | | | ||||||||| ||| |||||| || || |||||| Sbjct 4161 CCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGCCTGAAGACG 4220 Query 55904 GGTATGTACTATCTGCGGAC 55923 || |||||||| ||||| || Sbjct 4221 GGCATGTACTACCTGCGAAC 4240 >seq2043 Length=6959 Score = 152 bits (168), Expect = 6e-32 Identities = 244/347 (70%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || ||||| || | ||||||| || || |||||| ||||| || || || | |||| Sbjct 2058 AGTCGAGTAAAGGTATAACGAGGACTGGCGGCATCCGAACCACCTGCGAGTCGAGAACCG 2117 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | |||||| ||||| | | ||| | |||||| | ||||||||||| || |||| Sbjct 2118 AAGTTTCCACTTGGCTCTAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGGGCCAGA 2177 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 || || || ||||| || ||||| ||||| || |||||||| || | ||| Sbjct 2178 CCGATGATGGTCTGCTGGAGAGATGCTTCACCGTGGTGGTATGCCGTCTGTTCAGACACA 2237 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| | |||||||| |||| |||| |||||| |||||| ||| || | Sbjct 2238 TAACCAGCCAATTCCACCACCTTCTTGTCCTTGAC--CAGGTTTCTCTTGAAGCAAGCGT 2295 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGA 117596 | | ||||||||||||| ||||| | |||||| || ||||||||| ||| | Sbjct 2296 AGAGAACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGGATCGATCGC---A 2352 Query 117597 TGTCCTCAGC---GCTAAAGTTGGCCAAGTCCCGGTGGATGAAATCA 117640 ||| ||||| ||| ||| | | ||||||| |||||||||| Sbjct 2353 TGTTATCAGCCATGCTGAAGAGGATGAGCTCCCGGTTGATGAAATCA 2399 Score = 129 bits (142), Expect = 6e-25 Identities = 205/294 (70%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || || ||| | || || | ||||| |||||| |||||||| || || | || || Sbjct 2061 CGAGTAAAGGTATAACGAGGACTGGCGGCATCCGAACCACCTGCGAGTCGAGAACCGAAG 2120 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||||| ||| ||||| |||||| | ||||| || ||||| |||| | Sbjct 2121 TTTCCACTTGGCTCTAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGGGCCAGACCG 2180 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || ||| ||| |||||||||||||| || |||||||| || | | || Sbjct 2181 ATGATGGTCTGCTGGAGAGATGCTTCACCGTGGTGGTATGCCGTCTGTTCAGACACATAA 2240 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||| | | |||||||| ||||| | |||||| |||||| || ||||| | Sbjct 2241 CCAGCCAATTCCACCACCTTCTTGTCCTTGACCAGGTTTCTCTTGAAGCAAGCGTAGAGA 2300 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTG 152319 ||||||||||| || || || || |||| || ||| ||||| ||| || Sbjct 2301 ACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGGATCGATCGCATG 2354 Score = 96.9 bits (106), Expect = 4e-15 Identities = 229/341 (67%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 118003 GTTCAGCACGAGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAG 118062 ||| | || ||| ||||||||||| ||| || ||||| ||| |||||||||||||| Sbjct 2810 GTTGATCAGGAGACCCTTGATATGACTACCATCGTGATCCTGATCAGTCATGATCATCAG 2869 Query 118063 GCGGCCGTACCGTAAATCTCTCAGGGAGT-TATAAACCTTACCATGTTGGAGCCCGAGGA 118121 ||||||| || || |||| | | | | || |||| || | || || |||| Sbjct 2870 ATGGCCGTATCG-AAGACTCTTGGTGTCTGTGTACACCTGCTTGTGCTTCAGACCCAGGA 2928 Query 118122 TCTTTTTAAGGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAA 118181 || || | ||| | ||||| || | || | ||| | | | |||| || || | Sbjct 2929 ACTGCTTGATGTTCTGGATTTCCTGGTTCTTGGTGATCTGGTCGACGCTGGCATCGCGGA 2988 Query 118182 CGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCA-CAACGCTC 118240 ||||| || |||||| || ||||| || || |||| | ||| || | | | |||| Sbjct 2989 CGTTGAGCATCTTACCACGGAGTGGGAAGACACCAATGTGGTCGGGGTCAAGGATGGCTC 3048 Query 118241 AAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCG 118300 || | || ||| || |||| || |||||||| || || | || ||||||||||| Sbjct 3049 -GTCCAGAAACAGCCAGACCCTTGGCGGAGTCACCTTCAGTCAGGATCAGAGTGCACTCA 3107 Query 118301 GTGCTGCGATGAGTACCGGCCCAATTAGCATCATCCAGCTT 118341 || || ||||||| ||| | || || || ||||||| Sbjct 3108 TGGCCTCGGCGAGTACCTGCCAAGTTGGCCTCGACCAGCTT 3148 >seq3104 Length=5293 Score = 104 bits (114), Expect = 3e-17 Identities = 536/836 (64%), Gaps = 58/836 (7%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| || || ||||||||||| || | | |||||||||||||| Sbjct 1097 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1156 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTGCC-ATGAGG 74579 ||||||| ||||| | || ||| | |||||| | | | | | | |||| Sbjct 1157 AAGTCGAAGGGGTTGGTGGCCTTGTAGAC---CTTCTCGTTGCCGAGGGCGACGAGGAGG 1213 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || || || || || | ||||||||| |||| | || | |||||||| || | Sbjct 1214 CGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCG 1273 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697 || || || |||||||| | ||||| ||| | | | | ||| || | || | Sbjct 1274 CAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAA--TGGTGACGGCATCGGTGATGATGT 1331 Query 74698 TGTGAATGTCTT------TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACG 74750 || ||| | | ||| | ||| ||| ||||| |||| || | || | Sbjct 1332 CCTGGATGACCTGCTTGCTGGCACGGCCCTTG------AGGTGGGAGTGGAGGAGGCATG 1385 Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808 |||| || | || || || || || | || | || || ||||| | |||| Sbjct 1386 -CAAAGTC--GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 1442 Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868 ||||||| || ||||||||||| | ||| ||||||| |||| ||| |||||||||| Sbjct 1443 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 1502 Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG----GTGCATCGGAAGTC 74924 | || ||||| ||||||||||| || || || || || | || | | ||| Sbjct 1503 TACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTT-----GTC 1557 Query 74925 ----ATCCAAGTCTGA--GCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGAT 74977 ||||| || || ||||| || || ||| | | ||| |||| || || || Sbjct 1558 CTGGATCCA--TCGGATGGCCCAGTCGGC-CTTCTTGCGGATGCAGGGGATGGTCTCAAT 1614 Query 74978 CGCTTGGAAGAGGCTTGCCTTC--TCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGT 75035 || | ||||||| | ||| | | || ||||||| | ||||||| | || Sbjct 1615 GGCGTTGAAGAGG--TAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC 1672 Query 75036 GAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCC 75095 ||||| ||||| || || || ||| | | |||| | ||||||| | || ||| Sbjct 1673 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCC 1732 Query 75096 TCTGCAATCTGTACAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGT 75153 || | ||||| || | || |||| || | | | ||||| |||||||||||| Sbjct 1733 TCGGGGATCTGGACCTCGCCGCTGAATCGCTC--GACAAGGTTCTCGTTGACGATGCCGT 1790 Query 75154 CCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGT---GA 75210 | ||||| ||||| || || || | || ||| |||| ||| |||| | Sbjct 1791 CAGAGGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGC 1850 Query 75211 GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266 | |||| ||| || | || ||| | | ||||||||||||| | ||||||||| Sbjct 1851 GGTTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAA 1906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547063949194200