Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq730 96.9 3e-15
>seq730
Length=10273
Score = 96.9 bits (106), Expect = 3e-15
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || ||||| | |||||||| | || || |||||||||||||| ||
Sbjct 342 CTGCCAGCTCTACCAGCGATCCTGCGACATGGGTCTCGGCGTCCCGTTCAACATTGCCAG 401
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
||||| ||||| || ||||||| || || ||| | ||||| ||| || |||
Sbjct 402 CTACGCACTGCTGACACACATGATGGCGCACGTCTGCGAATTGGTGCCT-GGCAGC-CTC 459
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813
| |||| |||| |||||||| ||||||| ||||| | || ||| | |||
Sbjct 460 ACTCACGTCATGGGCGATGCGCACGTCTACCTCGACCACGTGGATGCTCTCAACACGCAG 519
Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAG 34859
|| | || |||||||| || || |||| | |||| |||||
Sbjct 520 CTTGAGCGCGAGCCCCGTGACTTTCCAGAGCTGGAGATTACTCGAG 565
Score = 96.9 bits (106), Expect = 3e-15
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 6486 CTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCC 6545
||||| |||| | |||| || || |||||||| || | ||||| | |||
Sbjct 565 CTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTTGAGAG 506
Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGG 6603
|| | ||||| ||||||| |||||||| |||| |||| | ||| || |||
Sbjct 505 CATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAG-GCTGCC-AGG 448
Query 6604 AACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAA 6663
||||| | ||| || || ||||||| || ||||| ||||| || |||||||||||
Sbjct 447 CACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGTTGAA 388
Query 6664 CGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
||| || || | |||||||| | ||||| || ||||||||||||
Sbjct 387 CGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAG 342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448137844688880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |