Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq730 118 8e-22
seq4637 84.2 2e-11
seq2118 82.4 6e-11
>seq730
Length=10273
Score = 118 bits (130), Expect = 8e-22
Identities = 202/289 (70%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084
|||||||| || |||| | |||||||| ||||| | |||| | ||| ||| ||
Sbjct 629 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 571
Query 27085 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 27140
|| || | | ||| ||| |||||| | |||||| | ||| ||||| || ||
Sbjct 570 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 511
Query 27141 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCC 27200
|| | |||||||| || ||||||||||| || || |||| | ||| | | || |
Sbjct 510 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTGC 452
Query 27201 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 27259
| || | | || |||||| |||||||||| || || || | ||||||||| ||||
Sbjct 451 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 392
Query 27260 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
| || || || ||||| |||||||| | || | |||||||||||| ||
Sbjct 391 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 343
>seq4637
Length=3674
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 27573
|||| ||||||||| |||||||| || || || || || | || | ||| | || |||
Sbjct 10 TGCCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCG 69
Query 27574 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 27633
||||| | || || | ||| || ||| ||||||||||||| | || |||| |
Sbjct 70 AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTG 129
Query 27634 AGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 27692
|| ||||| |||| ||||| || |||||| || ||||| | | ||||||
Sbjct 130 AGGCTGGTGGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCGCG 188
Query 27693 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
||||| | |||||| |||||||||||
Sbjct 189 GGTGAAGACGCGCTTGGTGGTGAGGAGGGG 218
>seq2118
Length=7067
Score = 82.4 bits (90), Expect = 6e-11
Identities = 130/180 (72%), Gaps = 6/180 (3%)
Strand=Plus/Minus
Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568
||||||||| | ||||||| ||| | || |||| || ||||||||||| || |
Sbjct 1548 CGTCAAGGTCCGTGTGAGGACGACCAAGATTCCCCAGATTGGCGACAAGTTTGCCTCTCG 1489
Query 48569 TCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCCTTCGA 48626
|||||| || ||||| || ||| | | | | ||| |||||||| |||||||||
Sbjct 1488 TCACGGA-CAGAAGGGTACCATTGGTGT-GACGT-ACCGTCAGGAGGATATGCCCTTCAG 1432
Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686
|| ||| || ||| || ||| | ||||| |||||||||||| |||| || | |||||
Sbjct 1431 CAGGGAGGGTGTGACACCGGACATTATCATTAACCCCCACGCCATTCCGTCGCGAATGAC 1372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369407094610499
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |