Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq730 118 8e-22 seq4637 84.2 2e-11 seq2118 82.4 6e-11 >seq730 Length=10273 Score = 118 bits (130), Expect = 8e-22 Identities = 202/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084 |||||||| || |||| | |||||||| ||||| | |||| | ||| ||| || Sbjct 629 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 571 Query 27085 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 27140 || || | | ||| ||| |||||| | |||||| | ||| ||||| || || Sbjct 570 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 511 Query 27141 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCC 27200 || | |||||||| || ||||||||||| || || |||| | ||| | | || | Sbjct 510 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTGC 452 Query 27201 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 27259 | || | | || |||||| |||||||||| || || || | ||||||||| |||| Sbjct 451 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 392 Query 27260 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 | || || || ||||| |||||||| | || | |||||||||||| || Sbjct 391 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 343 >seq4637 Length=3674 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 27573 |||| ||||||||| |||||||| || || || || || | || | ||| | || ||| Sbjct 10 TGCCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCG 69 Query 27574 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 27633 ||||| | || || | ||| || ||| ||||||||||||| | || |||| | Sbjct 70 AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTG 129 Query 27634 AGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 27692 || ||||| |||| ||||| || |||||| || ||||| | | |||||| Sbjct 130 AGGCTGGTGGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCGCG 188 Query 27693 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||| | |||||| ||||||||||| Sbjct 189 GGTGAAGACGCGCTTGGTGGTGAGGAGGGG 218 >seq2118 Length=7067 Score = 82.4 bits (90), Expect = 6e-11 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568 ||||||||| | ||||||| ||| | || |||| || ||||||||||| || | Sbjct 1548 CGTCAAGGTCCGTGTGAGGACGACCAAGATTCCCCAGATTGGCGACAAGTTTGCCTCTCG 1489 Query 48569 TCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCCTTCGA 48626 |||||| || ||||| || ||| | | | | ||| |||||||| ||||||||| Sbjct 1488 TCACGGA-CAGAAGGGTACCATTGGTGT-GACGT-ACCGTCAGGAGGATATGCCCTTCAG 1432 Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686 || ||| || ||| || ||| | ||||| |||||||||||| |||| || | ||||| Sbjct 1431 CAGGGAGGGTGTGACACCGGACATTATCATTAACCCCCACGCCATTCCGTCGCGAATGAC 1372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369407094610499