Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1268 107 4e-18
seq5434 98.7 2e-15
seq2318 93.3 1e-13
>seq1268
Length=8946
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| ||||||||||| || ||||| || ||||||||||| |||| | || |
Sbjct 5211 GAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 5152
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || || || |||||||| | ||||||||| | | ||| || ||
Sbjct 5151 ACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTC 5092
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || || | || | | | || ||| || || |||||
Sbjct 5091 CTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGT 5032
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||||||||| || |||| ||||||
Sbjct 5031 GATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 4993
Score = 98.7 bits (108), Expect = 2e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||||| || |||||||||||||||| | || | |||||
Sbjct 4474 GAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATC 4415
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || |||||||| || || | ||||||||| | | ||| || ||||| ||
Sbjct 4414 CTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 4355
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || |||||| | || | | | || || ||| || || || ||||| ||
Sbjct 4354 CTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGT 4295
Query 152072 TTTGCCCGT 152080
||||||||
Sbjct 4294 CTTGCCCGT 4286
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || ||||| ||||| || ||||||||||| ||| | ||||| || ||
Sbjct 4976 AGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 4917
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| || | ||| || || | | || |||||||| ||
Sbjct 4916 TCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCC 4857
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||| ||| | || | | |||| || || || ||||| || || ||
Sbjct 4856 TGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTC 4797
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||||| ||||||
Sbjct 4796 TTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 4765
>seq5434
Length=2800
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | |||| ||||| || || || || ||||||||
Sbjct 389 TTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 330
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | ||| || ||||| || || || || |||||| | ||
Sbjct 329 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 270
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || || || || || || |||||||| || |||||||||||
Sbjct 269 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 211
>seq2318
Length=6151
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||| || ||||||||||| ||| | || | |||||
Sbjct 917 GAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 858
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 857 CTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 798
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | |||| ||| ||| || || || || || ||
Sbjct 797 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGT 738
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| |||||||| ||||| || |||| |||||| || ||
Sbjct 737 CTTCCCCGTGAGGGTCTTGACAAAGATCTGCATCTTGCC 699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153492181379659
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |