Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 131 4e-25 >seq9 Length=3473953 Score = 131 bits (144), Expect = 4e-25 Identities = 314/467 (67%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||||||||| |||| | |||||| ||||| || | ||| | || | Sbjct 1908942 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTAT-CT-TCTTCAGTGGTG 1908885 Query 230229 T-TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 ||| | ||||||| ||||| ||| ||| | |||||||| || | | || | Sbjct 1908884 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCA 1908825 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| ||||||||||| || | || | | || | | || Sbjct 1908824 ACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTC 1908765 Query 230348 AGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | ||| || | || | || | ||| | || | | ||||| || || || || Sbjct 1908764 ACCTCAAGGGTCGTGCCAGCAAGC-AGATGATCCAGGATATCATCACTGATGCCGTCACC 1908706 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | || ||||||| | || ||| |||| ||| ||| | ||||||||| |||| Sbjct 1908705 ATTGAGCAGGAGTTTCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGAC 1908646 Query 230467 CTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| || ||||| || ||||| || || || | |||| || ||||| ||||| Sbjct 1908645 CTCATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAG 1908586 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || || ||||| | | |||||||| | || |||||| ||| || ||| || ||| Sbjct 1908585 AAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAG 1908526 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||||||| || |||||||| ||||| |||| | ||||||| Sbjct 1908525 ACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAGAAGGCTGGTGT 1908479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818199157640