Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6 318 2e-81 >seq6 Length=4141359 Score = 318 bits (352), Expect = 2e-81 Identities = 1107/1701 (65%), Gaps = 85/1701 (5%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||| | || ||||| || Sbjct 1575146 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTATCGAGCGCCCTCA 1575088 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 1575087 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 1575034 Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || ||||| || || |||| || || | |||||||| || | || || Sbjct 1575033 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACTC 1574978 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | |||||| || || | | | || || |||| |||||||| | | | ||||||| Sbjct 1574977 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 1574918 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| |||| || || || |||| ||||| | || ||||||| | Sbjct 1574917 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1574858 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| || | ||| | ||||||| || | | ||||| ||| Sbjct 1574857 CTGGTGGTATCGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 1574799 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| |||||||| | ||||| ||||||||||| || |||| ||||| | Sbjct 1574798 ACCAACGG-TACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1574740 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||| |||||||||||||| ||||| ||| || ||||| || || ||||||||| Sbjct 1574739 GTATGTCGACCAGGGTGGCAACAAGCGACCAGGTGCTTTTGCCATCTACCTCGAGCCTTG 1574680 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || || || ||||| ||||| || ||| || || ||||| | || Sbjct 1574679 GCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCATGGTAAGGAGGAGGTCCG 1574620 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| |||||||| ||| ||| |||||| | |||| | ||| |||||||| || || Sbjct 1574619 TGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 1574562 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TAT 364042 | | | | | ||| |||| | ||||| |||| || || || || |||| || ||| Sbjct 1574561 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAT 1574502 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | | ||||| |||||||||| || |||||| |||| ||| |||| Sbjct 1574501 --GGAGAGGAATTCGAGGCTCTGTACGAAAAGTTCGAGAAGGAGGGCAAGGGTCGCAAGA 1574444 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 |||| || |||||||| |||| ||||| | || | |||| |||||| |||| | Sbjct 1574443 CAATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACC 1574384 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | Sbjct 1574383 CATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA 1574324 Query 364223 TTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || | || |||||| || || || ||||| || ||| ||||| |||||| || Sbjct 1574323 -TCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCT 1574265 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTT 364335 || || |||||||| || | | || || | || | | | |||| || | Sbjct 1574264 GTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTAC 1574205 Query 364336 GACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATC 364395 ||| | || | || | | || | | || || | |||| || ||||| | ||| Sbjct 1574204 GACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATC 1574145 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGAT 364454 || ||| | || || ||| | || | || ||| ||||| || || || || Sbjct 1574144 GATGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCTAT 1574086 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGAT 364512 |||||||||||| || ||||| || || | ||| | ||||| ||| | || || Sbjct 1574085 TGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAG 1574028 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || || || ||||||| || || ||| ||||||| || || || ||| || || | Sbjct 1574027 TCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCTC 1573968 Query 364573 ACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631 |||| || |||| | |||| || |||| ||||| || | |||| || || Sbjct 1573967 ACTGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCTCC 1573909 Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691 || |||| | |||||||||| | ||||| |||| ||| || | || ||| | Sbjct 1573908 CGCATCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCGGACCTCTGGGA 1573849 Query 364692 CTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751 ||||| || || || | || |||| || || | || ||| |||| Sbjct 1573848 TTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCA-TC----------CGTAACAG- 1573801 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 | ||| || ||| ||||||||||||||||| || | Sbjct 1573800 ----------TCTGCTCCT--TGC-----------TNAACAACGAGTGCTTCGAGCCCTA 1573764 Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || |||| | || |||||| ||||| | || || || | ||| || || | Sbjct 1573763 CACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTG 1573704 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 || ||||||| ||| |||| || |||||| || ||||||||| ||||| Sbjct 1573703 GCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCAT 1573644 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 || | |||||||| | ||||||||||| | || | || | ||| || | || Sbjct 1573643 TGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTCTGTA 1573584 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 ||| || || ||||| || || ||| || || | ||||| || ||||| ||||| Sbjct 1573583 CAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCGGATCGAGGTGC 1573524 Query 365052 TTTTATCTGTCAGAGCCAGTC 365072 || || |||| |||||| Sbjct 1573523 ATTCATTGATCAGTCCCAGTC 1573503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346452734696