Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq9 129 1e-24 seq8 129 1e-24 >seq9 Length=3473953 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||||| |||| ||||||||| || || | ||||| Sbjct 2591636 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 2591577 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| ||||||||||| || || || || ||| Sbjct 2591576 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 2591517 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||||||| Sbjct 2591516 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 2591457 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || ||||| || Sbjct 2591456 TTCCCCGTGAGGGTCTTGACGAAAATCTG 2591428 >seq8 Length=4055048 Score = 129 bits (142), Expect = 1e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || || ||||| ||||| |||||||| |||| ||||||||| ||| || Sbjct 2978943 CGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG 2978884 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || |||||||| ||||||||||| |||||| ||| || Sbjct 2978883 CGGCCATCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGAATACCC 2978824 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || ||||||||||| |||||| Sbjct 2978823 TCCTTGTCCTGAATCTTGCTCTTCAC 2978798 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||||||||| || |||||| |||||||||| | || ||| ||| |||||| ||||| Sbjct 2978849 CTTATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCTTGAGCGACTACAACATCCAG 2978908 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||| ||||||||||| ||| | ||||||| Sbjct 2978909 AAGGAGTCAACTCTTCACCTCGTTCTCCGACTTCG 2978943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915135088676