Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-19 >seq1 Length=6191809 Score = 113 bits (124), Expect = 3e-19 Identities = 199/290 (69%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || || || || ||||| ||||| | ||| | || | |||| | || Sbjct 2105374 ACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACC 2105315 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || |||| | | |||| ||||| ||| |||||||| | ||| Sbjct 2105314 TCGAAGATACCCTCCTCAATGGTGAGGAGAGACACATCGAAGGTACCACCACCAAGATCG 2105255 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || ||||||||||| || |||| || ||| Sbjct 2105254 AAGATCAGGACGTTACGCTCGCCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCGGCA 2105195 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || |||| | ||| |||||||| || || || ||||| || Sbjct 2105194 GCAGTAGGCTCGTTGATGATTCGAAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTG 2105135 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 |||||||| | || |||||||| || || ||||| ||||||| ||| || Sbjct 2105134 GTGGCTTGACGCTGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACAGC 2105085 Score = 98.7 bits (108), Expect = 8e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| || |||||| || |||| || |||||||| || |||||||| | || |||||| Sbjct 1967373 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 1967432 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| || |||| | || ||||||||||||| | |||| Sbjct 1967433 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTTCCTCGCAGTATT 1967492 Query 668975 GC 668976 || Sbjct 1967493 GC 1967494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780801161230168