Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 259 9e-64 seq9 197 3e-45 >seq6 Length=4141359 Score = 259 bits (286), Expect = 9e-64 Identities = 1205/1884 (64%), Gaps = 127/1884 (7%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||||||||| Sbjct 1573368 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTG 1573427 Query 212613 AGGCC---CTTGCCCCAGCCGTGC-ATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| |||||| ||| | |||||| |||| |||| | || | Sbjct 1573428 AGGCCAAGCTT---CCAGCC-TGCGAAGTGCATACTGGTGA---TCTTGCCC---ATCGT 1573477 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | |||||| ||||| ||| || ||||||| | Sbjct 1573478 GGGGTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAATGCACC 1573528 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | || || ||||| | | || | | ||| |||| |||||| || |||||| | | Sbjct 1573529 TCGATCCGCAGCCATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAG 1573588 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||| ||| | |||| | ||| |||||||| | || || || |||| Sbjct 1573589 AGCCTTGACGTCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAG 1573641 Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900 | || | ||| ||| | ||| ||| || ||| || | ||| ||||| | Sbjct 1573642 CAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC 1573700 Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || |||||||| | |||||| ||||| | ||| || | | ||||| | || || Sbjct 1573701 AGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAG 1573760 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||||||||||| || ||||||||| || | || | |||| | | Sbjct 1573761 GTGTAGGGCTCGAAGCACTCGTTGTTNAGCAAG---------GAGCAGACTGTT---ACG 1573808 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCC 213080 | ||| | ||| | | ||| | | |||| | ||| ||| || Sbjct 1573809 GATGCC-------GTGTGT-CTTGACTTCCT-CTCG---AAGAG----------TCT-CC 1573845 Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG 213140 || ||||| |||||| | ||| |||||||||||||||||||| | ||| Sbjct 1573846 CAATCCCAG---------AGGTCCGAGGGCTTGACGTTCCACATGTCAAACTGGAGGATA 1573896 Query 213141 CCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAG 213196 || |||| |||| |||| | | | ||||||||| || | |||||| ||||| Sbjct 1573897 CC----CTCAGATGCGGGAGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAG 1573952 Query 213197 CTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCT 213255 || ||| ||| || |||||||||| || ||||| || || |||| | ||||||||| Sbjct 1573953 CT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAGCT 1574011 Query 213256 TCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCT 213315 ||||| || ||| ||||||||| || |||| |||| || || || | Sbjct 1574012 CACGAGCCTCGGGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCGGCAAGGCCTT 1574071 Query 213316 GGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGG 213374 | || || | || || |||| ||| | || |||| ||| |||| ||||| | ||| Sbjct 1574072 GAACACCAAGACCAATAGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGACAGGG 1574130 Query 213375 TAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCC 213434 || ||| |||||||||||||| |||||||| | | || | |||| | | | Sbjct 1574131 TAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGC 1574190 Query 213435 AGGTACTCGTGATTGAACACGTAGCCCCCGTCCT-GCACAAACTCAGGCAGGGC-GATGC 213492 || | || |||| |||||| | || | | | | | | ||||| || | Sbjct 1574191 AGCTTCT------TGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGAGAC 1574244 Query 213493 TG----GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTG 213548 | || |||||||| || || ||||| | || | |||||| || || || ||| Sbjct 1574245 AGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTG 1574304 Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA- 213607 || |||||| || ||||||||| || ||||||| ||||| ||| ||| | |||| Sbjct 1574305 CAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGGC 1574363 Query 213608 ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCA 213667 |||||||||||||||| | ||| |||||||| ||||| | | || || | ||| Sbjct 1574364 ATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 1574423 Query 213668 GAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTA 213727 || | | ||||||| | | ||| | | | | |||| ||| |||||| Sbjct 1574424 AAGCTTCTGAGCCTTGATTGTCTTGC-GACCCTTGCCCTCCTT--CTCGAACTTTTCGTA 1574480 Query 213728 GAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACAT 213787 || | | |||||| | || || | | || || || || ||| ||||| Sbjct 1574481 CAGAGCCTCGAATTCCTCTCCATAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACAT 1574540 Query 213788 GAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || ||||||| |||| | | || | || |||||| || || |||| ||| || || Sbjct 1574541 CAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGC 1574600 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 ||| || || | || | ||| ||| ||| ||| || || ||||| || || Sbjct 1574601 AAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCATGGTTCTTACGGAGATCAAGGAA 1574660 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 || |||| || | |||||| ||||| | |||||||||||| || || | || | || Sbjct 1574661 ATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCTGGTCGCTTGTT 1574720 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 ||| |||||||| || || || ||||||||| || || | || || | || Sbjct 1574721 GCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACC 1574780 Query 214025 GTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCAT 214081 || || ||| |||||||| || || || || ||||| | || | | | ||| ||| Sbjct 1574781 ATTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACAT 1574839 Query 214082 GGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141 ||| || || ||||| || ||||||||||||||| ||| | | | ||| || Sbjct 1574840 TTAGA--CCGATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTA 1574897 Query 214142 GATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201 ||| || | || ||||| || | | | | ||||||||| || | |||||| Sbjct 1574898 GATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTG 1574957 Query 214202 GGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261 | | ||| | ||||| || |||||| ||||| | | |||||| |||| | || Sbjct 1574958 AGGGGTGCCGGCATTGAAGAGAGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAG 1575017 Query 214262 CCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCA 214320 |||| ||||||| |||| ||| || | ||| | || | || | || Sbjct 1575018 ATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCA 1575076 Query 214321 TCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGAGCG 214378 | | ||||||||| || | ||| || ||| | | |||||| ||||| || || Sbjct 1575077 TGATCATGTGCTGAGGGCGCTCGAT--AATCTTACCGTCAATCTTGAGGAGGTATGATCG 1575134 Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402 ||||| ||||||||| |||||||| Sbjct 1575135 CTCCAAAGTCTTGAAGCCAAAGTA 1575158 >seq9 Length=3473953 Score = 197 bits (218), Expect = 3e-45 Identities = 490/735 (67%), Gaps = 23/735 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | |||||||||||||| ||||| || | | ||||||||||| Sbjct 1908490 CTGGTAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 1908549 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | || | | Sbjct 1908550 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGA 1908608 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||| ||||||| ||||||| ||||||||| | ||||| Sbjct 1908609 GACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1908668 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || || ||| | ||||||||||||| ||| || ||||| || | || Sbjct 1908669 -CACAGGGAAGAGCTTCGGTGAGAAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 1908727 Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCA 48128 | || || | |||| ||| || ||| | | ||| | | ||| | Sbjct 1908728 TCCT------GGATCATCTGC----TTGCTG-GCACGACCCTTGAGGTGAGAGTGGAGGA 1908776 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 |||||||||||| |||| | || ||||| || ||||||| |||||||||| | Sbjct 1908777 GGCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCA 1908836 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 |||||||||||| || | || ||||||||||| || | ||||| | ||| ||||| Sbjct 1908837 GACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGA 1908896 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 |||| ||||| || || || || || ||| | || | || || | | ||| || Sbjct 1908897 AGATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGCCCTTATCCT 1908956 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 |||||| | |||||||| |||||||| |||||| || || ||||| ||||| Sbjct 1908957 GGATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 1909016 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 |||||| | | | || | | ||| | || || || || | ||| Sbjct 1909017 TGAAGAGATAGGTTCGCTGGGCGGGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTAGG 1909076 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| || || | ||||| || ||||||||| ||||||||| | |||||| | Sbjct 1909077 TCTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGA 1909136 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || ||||| ||| | || ||||| ||||| || ||||| || |||| Sbjct 1909137 TCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAG 1909196 Query 48549 CAAAGAAGGCAAGGA 48563 | ||||| ||||||| Sbjct 1909197 CGAAGAAAGCAAGGA 1909211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527816299520