Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 5e-14 >seq7 Length=4400171 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 |||||||| ||||||||||||||| || | || | ||| || ||||| ||||| Sbjct 43601 TACATCCTCGACGCAGCTGAGGAAAACGGCATAGACTTGCCTTATTCTTGCCGGGCAGGG 43542 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 ||||| || || ||| | || |||||||| || || || || || |||||||| || | Sbjct 43541 GCTTGCTCTTCTTGTACAGGCAAACTCGTATCGGGAACAGTCGATCAAAGCGATCAAAGC 43482 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCAT-TCTGACT-TGTGTTTCTTATCCTA 158518 || | || || | || || || | || | || ||| ||| ||||| |||| || | Sbjct 43481 TTTTTAGATGACGGGCAGATAGAGGCAGGGT--ATGTCTTACTCTGTGTCGCTTACCCGA 43424 Query 158519 CAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACTGTATTGATG 158567 | || || || || || ||| | | |||||||||| |||| | ||| Sbjct 43423 CTAGCGACTGCGTTATAAAGAGTCATCAGGAAGAGGATTTGTACTAATG 43375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547744269552480