Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 129 7e-24 seq9 123 3e-22 >seq5 Length=4758267 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 ||||||||||||||||||||||||| || || |||| |||||| | || ||||| |||| Sbjct 2544616 CCAACTACCTCGACATCAAGCCTCTTCTTGACGTTGGCTGCAAGACCGTTGCCAATATGA 2544675 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||| ||||||||||||||||| || || ||||| | | ||| Sbjct 2544676 TCAAGGGCAAGTCTCCCGAGGAGATCCGCAAAACTTTCAACATTACGAACG 2544726 >seq9 Length=3473953 Score = 123 bits (136), Expect = 3e-22 Identities = 202/286 (71%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| || | || || |||||||| || ||||| Sbjct 1908799 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGAGACCACGCTT 1908858 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | ||| || ||| ||||| ||||| || || ||||| Sbjct 1908859 CTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCAAA 1908918 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | ||| |||| |||||||| | || ||||| | | |||||| || ||||| Sbjct 1908919 GGCAACGAGACGCTGGGCAAAGGAG--GA-GCCCTTATCCTGGATCCATCGGATGGCCCA 1908975 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTT 869417 ||| ||||| || | | | || | || || |||||| ||||| | ||| | | Sbjct 1908976 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATAGGTTC-GCT 1909034 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| || ||||||| || |||||||| ||||| || |||||||| Sbjct 1909035 GGGCGGGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTAGGTCTC 1909080 Score = 104 bits (114), Expect = 3e-16 Identities = 176/252 (70%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||| | || ||| ||| || |||||||||||||| | || ||||| Sbjct 1908485 GCCTTCTGGTAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGGGAGATG 1908544 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||||| | ||||||| ||| ||| || |||||| Sbjct 1908545 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGA-- 1908602 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || || || || ||||| ||||| ||||| || ||||||| | | ||||||||||| Sbjct 1908603 CAAGGAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGA 1908662 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 ||| || || || | ||| | | |||||| | ||| || |||||| || || Sbjct 1908663 GGAGGGCACAGGGAAGAGCTTCGGTGAGAAACTCCTGCTCAATGGTGACGGCATCAGTGA 1908722 Query 868929 TGATCTGCCTGG 868940 |||| | ||||| Sbjct 1908723 TGATAT-CCTGG 1908733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107104076315676