Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 seq8 82.4 7e-11 >seq9 Length=3473953 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| ||| || ||| |||||||| || || | | Sbjct 2591618 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 2591559 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || ||||| || || || || || || | Sbjct 2591558 AAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 2591499 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | |||||| || | || | ||| || || || || || || Sbjct 2591498 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 2591439 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 2591438 ACGAAAATCTGCAT 2591425 >seq8 Length=4055048 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||||||| ||| || |||||| ||||| || || | Sbjct 2978918 TTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCTTCCAGCTGCTTGCCAG 2978859 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| |||||||| ||||| ||||| || || || || || Sbjct 2978858 CGAAGATAAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTC 2978816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608650130080