Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 8e-12 >seq7 Length=4400171 Score = 86.0 bits (94), Expect = 8e-12 Identities = 171/251 (68%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 177367 CCTTCCCTTGTGAAGACGATCAGTACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATA 177426 ||||| || || || ||| |||||||||||||| ||||| ||| || | || Sbjct 43624 CCTTCAGCTGCGACGATGATACATACATCCTCGACGCAGCTGAGGAAAACGGCATAGACT 43565 Query 177427 TTAATTACTCATGCCGCGCTGGTGCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTA 177486 | ||| || ||||| || || ||||| || || ||| | || ||||| | || | Sbjct 43564 TGCCTTATTCTTGCCGGGCAGGGGCTTGCTCTTCTTGTACAGGCAAACTCGTATCGGGAA 43505 Query 177487 GTGTAGATCAAAGCGATCAATCGTTCTTGGATGACGATCAAATGGAGTCAGGATTTATTC 177546 || ||||||||||||||| || || ||||||| || || ||| |||| | | | | Sbjct 43504 CAGTCGATCAAAGCGATCAAAGCTTTTTAGATGACGGGCAGATAGAGGCAGGGTATGT-C 43446 Query 177547 TGAC-CTGTGTGTCATATCCCACCAGCGATTGTGTAGTCTTGACCGATCAGGAAGAGAGT 177605 | || |||||| | || || || ||||| || || | || ||||||||||| | Sbjct 43445 TTACTCTGTGTCGCTTACCCGACTAGCGACTGCGTTATAAAGAGTCATCAGGAAGAGGAT 43386 Query 177606 CTTTACTGATG 177616 | |||| ||| Sbjct 43385 TTGTACTAATG 43375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610326334736640