Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 8e-15 seq8 95.1 8e-15 >seq9 Length=3473953 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| || |||||||| || || || || || Sbjct 2591422 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 2591481 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || || Sbjct 2591482 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 2591541 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || ||||| ||||| || || || || | ||||| | |||| ||| Sbjct 2591542 CAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 2591601 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 2591602 AACATCCAGAAGGAGTCCAC 2591621 >seq8 Length=4055048 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || || || ||||| ||||| || | Sbjct 2978382 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCC 2978441 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| ||||| || || | || || || || Sbjct 2978442 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 2978501 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || |||||||| || || || |||| |||||| | ||||||||| Sbjct 2978502 CAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 2978561 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || |||||||| | ||| | ||| Sbjct 2978562 ATTCAGAAGGAGTCCACTCTTCATCTTGTT 2978591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007836857424