Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq279 136 8e-27 >seq279 Length=355525 Score = 136 bits (150), Expect = 8e-27 Identities = 315/467 (67%), Gaps = 6/467 (1%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||||||||| |||| | |||||| ||||| || | ||| | || | Sbjct 82817 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTAT-CT-TCTTCAGTGGTG 82874 Query 230229 T-TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 ||| | ||||||| ||||| ||| ||| | |||||||| || | | || | Sbjct 82875 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCA 82934 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| ||||||||||| || | || | | || | | || Sbjct 82935 ACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTC 82994 Query 230348 AGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | ||| || | || | || | ||| | || | | ||||| || || || || Sbjct 82995 ACCTCAAGGGTCGTGCCAGCAAGC-AGATGATCCAGGATATCATCACTGATGCCGTCACC 83053 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | || ||||||| | || ||| |||| ||| ||| | ||||||||| |||| Sbjct 83054 ATTGAGCAGGAGTTTCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGAC 83113 Query 230467 CTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| || ||||| || ||||| || || || | |||| || ||||| ||||| Sbjct 83114 CTCATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAG 83173 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || || ||||| | | |||||||| | || |||||| ||| || ||| || ||| Sbjct 83174 AAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAG 83233 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 |||||||||||||| |||||||| ||||| |||| | ||||||| Sbjct 83234 ACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCTGGTGT 83280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057811679986670