Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 2e-11 >seq13 Length=660952 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| || || | |||||| ||||| || || || |||||||||||| | Sbjct 442991 CCGCCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTC 443050 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || ||||| || ||||||| | || |||||| || Sbjct 443051 AAGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGA 443110 Query 18219 ACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || ||| ||| | ||| || | | | |||||||| || ||| Sbjct 443111 ATACCCTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATAGTGTCACTGGATTCGAC 443169 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| | || || || | || || || ||||| ||||| Sbjct 443170 CTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 443217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379339797461205