Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq59 113 4e-20 seq224 84.2 2e-11 >seq59 Length=53314 Score = 113 bits (124), Expect = 4e-20 Identities = 337/510 (66%), Gaps = 19/510 (4%) Strand=Plus/Plus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 |||||| || |||| | |||||||| || |||||||||| | |||||||| ||| Sbjct 45305 CTTGCCCTCCTTCTCGAACTTTTCGTACAGAGCCTCGAATTCCTCTCCATAGCAGTCGGC 45364 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCT 148354 | || || ||||||| ||||||||||| || ||| | | || ||||| || | Sbjct 45365 GAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGT---CACCGTTCTTTTCAACACG 45421 Query 148355 CTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC 148414 |||||| || |||||||| |||| | ||||| | |||||| || || | ||||| Sbjct 45422 CTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTC 45481 Query 148415 GGCACCCATATTGCGCTT---TAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471 ||| || | ||| ||||| | ||| || || || | |||||||||||| Sbjct 45482 CTTACC---ATGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTC 45538 Query 148472 GATGTATACGGTCATGGCGCCT--TTCCTT-TTACCTCCTTGATCGACATGGCGTAGCA- 148527 || ||| | || | || ||| | ||| || || || || ||||||| || |||| Sbjct 45539 GAGGTAGATGGCAAAAGCACCTGGTCGCTTGTTGCCACCCTGGTCGACATACCG-AGCAG 45597 Query 148528 TGCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAA 148587 || | || || ||||| | ||| | | || || || ||||| || | | Sbjct 45598 TGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGA 45657 Query 148588 TTTTACTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTGTTTA 148646 | | || || ||||| | ||| ||||| || ||||| || || | || Sbjct 45658 TGTATGAGCCAGTAGCACGAATACG-GTGCACATTTAGACCGATACCACCAGCCATCTTG 45716 Query 148647 GATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATG 148706 || ||||||||||| ||||| || | ||||| || | ||||||||| || | || Sbjct 45717 GAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATA 45776 Query 148707 TTAAGCAGGTAGCACGATGACATTTGAGGC 148736 | || || | |||| ||||||| ||| ||| Sbjct 45777 TCAACCAAGAAGCAAGATGACAATTGGGGC 45806 >seq224 Length=426345 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 275271 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 275212 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 275211 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 275152 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | ||||| || ||||| |||| | | | | |||||||| Sbjct 275151 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 275092 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || |||| |||||||| Sbjct 275091 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 275056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656961198480