Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq59 383 4e-101 >seq59 Length=53314 Score = 383 bits (424), Expect = 4e-101 Identities = 1127/1704 (66%), Gaps = 56/1704 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||| | || ||||| || Sbjct 45997 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTATCGAGCGCCCTCA 45939 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 45938 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 45885 Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || ||||| || || |||| || || | |||||||| || | || || Sbjct 45884 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACTC 45829 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | |||||| || || | | | || || |||| |||||||| | | | ||||||| Sbjct 45828 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 45769 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| |||| || || || |||| ||||| | || ||||||| | Sbjct 45768 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 45709 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| || | ||| | ||||||| || | | ||||| ||| Sbjct 45708 CTGGTGGTATCGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 45650 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| |||||||| | ||||| ||||||||||| || |||| ||||| | Sbjct 45649 ACCAACGG-TACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 45591 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||| |||||||||||||| ||||| ||| || ||||| || || ||||||||| Sbjct 45590 GTATGTCGACCAGGGTGGCAACAAGCGACCAGGTGCTTTTGCCATCTACCTCGAGCCTTG 45531 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || || || ||||| ||||| || ||| || || ||||| | || Sbjct 45530 GCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCATGGTAAGGAGGAGGTCCG 45471 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| |||||||| ||| ||| |||||| | |||| | ||| |||||||| || || Sbjct 45470 TGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 45413 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TAT 364042 | | | | | ||| |||| | ||||| |||| || || || || |||| || ||| Sbjct 45412 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAT 45353 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | | ||||| |||||||||| || |||||| |||| ||| |||| Sbjct 45352 --GGAGAGGAATTCGAGGCTCTGTACGAAAAGTTCGAGAAGGAGGGCAAGGGTCGCAAGA 45295 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 |||| || |||||||| |||| ||||| | || | |||| |||||| |||| | Sbjct 45294 CAATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACC 45235 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | Sbjct 45234 CATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA 45175 Query 364223 TTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || | || |||||| || || || ||||| || ||| ||||| |||||| || Sbjct 45174 -TCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCT 45116 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTT 364335 || || |||||||| || | | || || | || | | | |||| || | Sbjct 45115 GTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTAC 45056 Query 364336 GACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATC 364395 ||| | || | || | | || | | || || | |||| || ||||| | ||| Sbjct 45055 GACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATC 44996 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGAT 364454 || ||| | || || ||| | || | || ||| ||||| || || || || Sbjct 44995 GATGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCTAT 44937 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGAT 364512 |||||||||||| || ||||| || || | ||| | ||||| ||| | || || Sbjct 44936 TGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAG 44879 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || || || ||||||| || || ||| ||||||| || || || ||| || || | Sbjct 44878 TCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCTC 44819 Query 364573 ACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631 |||| || |||| | |||| || |||| ||||| || | |||| || || Sbjct 44818 ACTGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCTCC 44760 Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691 || |||| | |||||||||| | ||||| |||| ||| || | || ||| | Sbjct 44759 CGCATCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCGGACCTCTGGGA 44700 Query 364692 CTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTAC 364748 ||||| || || || | || |||| || || | || ||| || ||| || Sbjct 44699 TTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT-- 44642 Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808 || || ||||| || || ||| | ||||| || || ||||||||||||||||| || Sbjct 44641 -GCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCC 44583 Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868 | || |||| | || |||||| ||||| | || || || | ||| || || Sbjct 44582 CTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCC 44523 Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928 | || ||||||| ||| |||| || |||||| || ||||||||| || Sbjct 44522 CTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCAT 44463 Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTAT 364988 ||| || | |||||||| | ||||||||||| | || | || | ||| || | Sbjct 44462 CATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTCT 44403 Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048 ||||| || || ||||| || || ||| || || | ||||| || ||||| || Sbjct 44402 GTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCGGATCGAGG 44343 Query 365049 TGCTTTTATCTGTCAGAGCCAGTC 365072 ||| || || |||| |||||| Sbjct 44342 TGCATTCATTGATCAGTCCCAGTC 44319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303338420410838