Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq59 192 7e-44 seq279 149 7e-31 >seq59 Length=53314 Score = 192 bits (212), Expect = 7e-44 Identities = 1165/1846 (63%), Gaps = 51/1846 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 44188 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 44247 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | |||||||| | | ||||| || | |||| | || || | |||| Sbjct 44248 CAAGCTTCCAGCCTGCGAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 44307 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||||| ||||| ||||| ||||| || |||||||| ||||| | || | Sbjct 44308 GGATGTTCAGTGACTGGGACTGATCAATGAATGCACCTCGATCCGCAGCCATCTGAACGA 44367 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 | | | ||| ||||| ||||| |||| || ||| | || | ||||| | Sbjct 44368 CCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCGGCAGGGATGT 44427 Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 113864 || || || ||||| ||| | | | ||| | | ||||||| | | |||| Sbjct 44428 TGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACC 44487 Query 113865 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCG 113924 | ||||| || | || |||| | || |||||||| |||||||| | Sbjct 44488 ACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAG 44547 Query 113925 CGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCA 113984 |||| || | | |||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct 44548 CGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCA 44607 Query 113985 AGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT 114044 || |||| ||| ||| || ||||| || || | ||| || |||||||||| || | Sbjct 44608 GAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGT 44667 Query 114045 TTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG 114102 | | | | | | | || || | | ||||| || || | | | || | | Sbjct 44668 GTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAATCCCAGAGGTCCGAGGGCTTGACGTT 44725 Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| ||||||||||||||||| | || || || || |||| || || ||| || Sbjct 44726 CCACATGTCAAACTGGAGGATACCCTCAGATGCGGGAGAACCCTTGAAGGTGGAGTAGGG 44785 Query 114163 GCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219 ||||| ||| |||| | ||||| || |||||| |||||||| || ||||| Sbjct 44786 ACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCTC 44842 Query 114220 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AA 114278 || || | || | | |||||| || || || | | || || | || Sbjct 44843 GAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCAA 44901 Query 114279 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338 || |||| || || ||||| ||||| || ||||| || || || | ||| ||| | Sbjct 44902 GGAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATAGGTCGGTGGCGCATGTTACTGT 44961 Query 114339 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 114398 | ||||| || || || || ||| |||||| | | | || || || | | Sbjct 44962 TGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAA 45021 Query 114399 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-ACA 114457 |||||| ||| | || ||||| | | | || | || || |||||| | | Sbjct 45022 CAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTA---GCAAG---CTTCATCGTAGT 45075 Query 114458 TACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 | | | | ||||| | || || || || || |||| | ||| || | || Sbjct 45076 TGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCAC 45135 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 |||||| |||||||| || || | || || || ||||| || | ||||||||| | Sbjct 45136 AGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGT 45195 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | ||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| Sbjct 45196 TGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGG 45255 Query 114633 ACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCC 114688 || ||||| || | ||| | | || | | || | | || | | | || | ||| Sbjct 45256 CCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG---ATTGTCTTGCGACCCTTG-CCC 45311 Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 114748 |||| |||| ||||| ||| || || || || || || || | || | ||| || Sbjct 45312 TCCTTCTCGAACTTTTCGTACAGAGCCTCGAATTCCTCTCCATAGCAGTCGGCGAGGCCA 45371 Query 114749 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808 || || | ||||| | || | ||| | ||| || ||||||||||||||||| Sbjct 45372 GGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAA 45431 Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868 || || |||||||| || || ||| ||||| || || | || || | || || Sbjct 45432 AGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCATGG 45491 Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928 || ||| | || | || || | || ||| | |||||| || || ||||| | || Sbjct 45492 TTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 45551 Query 114929 ATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 | | | ||| | || ||| |||||| ||||||| || ||| || || Sbjct 45552 AAAG-CACCT--GGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 45608 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 115040 || |||||||| |||| | ||||| ||| || || || || ||| || ||| | Sbjct 45609 ACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC- 45667 Query 115041 TATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 115100 | | || | | | || | | | ||| ||||| || ||| ||| ||||| | Sbjct 45668 -AGTAGCACGAATACGGTGCACATTTAGACCGATACCACCAGCCATCTTGGAGATCATGG 45726 Query 115101 CGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGA 115160 | || | ||||| | ||||||| || || || ||| |||| | | | | || Sbjct 45727 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA 45786 Query 115161 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 115220 |||| |||| ||| ||| || || || || |||||||| || || | || || Sbjct 45787 AGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGAGTGGGGGAAGCATGCG 45846 Query 115221 TGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC-GGCGGGAATGTCTTCCC 115277 ||| | | |||| |||||| || ||| ||||||||||| || | || || || | Sbjct 45847 TGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCG-ATATCATCAC 45903 Query 115278 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 115337 | ||||| | || || ||||| | ||||| || || || || | |||| | Sbjct 45904 CCCAGATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGATAATCTTACCGT 45963 Query 115338 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | | | | ||||||| |||||| ||||||| ||||| || Sbjct 45964 CAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 46009 >seq279 Length=355525 Score = 149 bits (164), Expect = 7e-31 Identities = 310/459 (68%), Gaps = 16/459 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 83266 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 83207 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || | | | |||| |||| ||| Sbjct 83206 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 83152 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||| | ||| ||||||||||| |||| |||| Sbjct 83151 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 83092 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || ||| ||| |||||| ||||| || | ||| Sbjct 83091 GCACAGGGAAGAGCTTCGGTGAGAAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 83032 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | || || | | | | || | | ||| | || | || ||| || |||| Sbjct 83031 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 82975 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || ||||| ||| || ||| Sbjct 82974 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGC 82915 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | |||||| || | || | ||| ||||||||| ||| Sbjct 82914 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCC 82855 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 || ||| || || |||| |||||||| ||||||||| Sbjct 82854 TCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG 82816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346812569720