Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq645 87.8 2e-12 >seq645 Length=205223 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 10237 ACACAATCGCTCGTGGGATAAGAAACACAG-GTCAGAAGGAAACCAGCATCGATCTGGTC 10295 || || ||||| || || |||| |||||| || ||| | || || || ||||| | Sbjct 157953 ACGCAGTCGCTAGTCGGGTAAGCGACACAGAGTAAGACATAC-CCTGCCTCTATCTGCCC 157895 Query 10296 ATCATCAAGGAACGATTGATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACA 10355 ||||| | || ||||||||||||||| || || ||||| | ||||||||||| ||| Sbjct 157894 GTCATCTAAAAAGCTTTGATCGCTTTGATCGACTGTTCCCGATACGAGTTTGCCTGTACA 157835 Query 10356 ACTCGAACAGGCACCAGCTCGGCACGAGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGC 10415 | || || || || || ||||| || || | ||| ||||| ||| ||||| || Sbjct 157834 AGAAGAGCAAGCCCCTGCCCGGCAAGAATAAGGCAAGTCTATGCCGTTTTCCTCAGCTGC 157775 Query 10416 ATCCAGAATGTA 10427 || || ||||| Sbjct 157774 GTCGAGGATGTA 157763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622117731106960