Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq623 226 4e-54 seq157 98.7 1e-15 >seq623 Length=206012 Score = 226 bits (250), Expect = 4e-54 Identities = 433/633 (68%), Gaps = 14/633 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 88028 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCC 87969 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 87968 TCCTCAATGGTGAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 87909 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || |||||||| |||||||| || || || || || || || || Sbjct 87908 TTACGCTCGCCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 87849 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || |||||| ||| || || || || | ||||| || || ||||| || Sbjct 87848 TTGATGATTCGAAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 87789 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| || || Sbjct 87788 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACAGCGTTGTTGACAGTCTCGCCAAGG 87729 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | || Sbjct 87728 TAAGACTCAGCGGTCTCGCGCATCTTGGTGAGGATCATAGCAGAGATCTCCTC-GGGGCT 87670 Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC--- 7872 | || || || || || || || || || || || ||||| || || |||| Sbjct 87669 GAAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGATGGGCTT----GC--CACCCTT 87616 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | || | ||| | | ||| ||||||||| | || |||| || | ||||| Sbjct 87615 GTCGACGATCTTGAAGGGGAAATGCTTCATATCGGCCTGAACCTCAGCATCGGCGAACTT 87556 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||||| | ||||| || || || || ||||| | |||||||| || |||||| Sbjct 87555 GCGACCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATAGCGACTTGGTT 87496 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| || || || || || ||||| || | || || || ||||| | || ||||| Sbjct 87495 CTTGGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGT 87439 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 ||||| || || |||||||| || || || || Sbjct 87438 AGTTCGGTTACCCTGGTCGTTGGCGATGATATC 87406 >seq157 Length=453166 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| ||||||||||| Sbjct 393963 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCAAAGATACC 393904 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | || ||||| || ||||||||||| || || | || | Sbjct 393903 GTCATCAATGGAGAGAAGAGAGACATCGAAGGTACCACCACCGAGATCGTA---GACGAT 393847 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | ||| || | | | |||| || |||||||| |||||||| || || || || | Sbjct 393846 GATC-TGTCGCTCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCT 393788 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | || || ||| ||| || || ||||| | | ||||| || || || |||| Sbjct 393787 CGTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTC 393728 Query 7695 GTTG 7698 | || Sbjct 393727 GCTG 393724 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 393665 CGTTGAAGTAGGCAGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 393606 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| || | | |||||| | Sbjct 393605 CAGCGACCTCCTTCATCTTGCCAAGAACCATGGCAGAGATCTCCTCGGGAGTAAACTGCT 393546 Query 7824 TC 7825 || Sbjct 393545 TC 393544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125583303560