Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq556 109 6e-19 >seq556 Length=842127 Score = 109 bits (120), Expect = 6e-19 Identities = 170/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | || ||||| ||||||| || || || || || || || |||||||| Sbjct 730540 ACCGTGGTAAACAGCGTAGAAAGCAGACATGTTGGCAAGAAGAGCCTGAGCAGTGCAGAT 730599 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| ||||| || || || | | ||| |||||||| | ||| || || || | | Sbjct 730600 GTTGCTGGTAGCCTTCTCACGACGAATGTGCTGCTCACGAGTCTGGAGAGCCAGGCGAAG 730659 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||||| ||||| | ||| || ||| |||| | ||||| ||||| | ||| Sbjct 730660 AGCAGGTTTGCCGAGACGATCCTTGGAAACACCAACAAGACGTCCAGGAATCTTGCGCTT 730719 Query 139451 ATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || | ||| || ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct 730720 GTACTTCTCAGATGTAGCGAAGAAAGCAGCATGGGGACCACCGTAGCCGAGAGGAACACC 730779 Query 139511 AAA 139513 || Sbjct 730780 GAA 730782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991821130680